BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05826 (UTR included)
(3769 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01028B2A06 904 0.0
BF01032B1D01 387 e-107
>BF01028B2A06
Length = 456
Score = 904 bits (456), Expect = 0.0
Identities = 456/456 (100%)
Strand = Plus / Plus
Query: 2356 tgttggcctctaagacctccaccgagctcatccgcaacgtgcgcgaactcgccgaaaacg 2415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttggcctctaagacctccaccgagctcatccgcaacgtgcgcgaactcgccgaaaacg 60
Query: 2416 accagggcatcacttacggggcgaaatctagtggctcaacttacactttctttgaaatgt 2475
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accagggcatcacttacggggcgaaatctagtggctcaacttacactttctttgaaatgt 120
Query: 2476 caagcagcgaaccatacaaaagcatgttccaaaaaatgaaagacgtcacaatgccttcga 2535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 caagcagcgaaccatacaaaagcatgttccaaaaaatgaaagacgtcacaatgccttcga 180
Query: 2536 ctaatgaggaaggaatagaaaaagtaatgaatgaaaaatatgcgttcttcgcggagtcca 2595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctaatgaggaaggaatagaaaaagtaatgaatgaaaaatatgcgttcttcgcggagtcca 240
Query: 2596 cgactatcgactacacgacggaacgtaactgtgaggtcacaagagtgggagatctcttag 2655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgactatcgactacacgacggaacgtaactgtgaggtcacaagagtgggagatctcttag 300
Query: 2656 atagtaaaggatatggcattgcaatgaaaaagaactcaccgtaccgacaggcgttgaatc 2715
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 atagtaaaggatatggcattgcaatgaaaaagaactcaccgtaccgacaggcgttgaatc 360
Query: 2716 tagcactgctgaatctgcaagaggcggggattcttagggagatgaaacatcgctggtgga 2775
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagcactgctgaatctgcaagaggcggggattcttagggagatgaaacatcgctggtgga 420
Query: 2776 aagaaatgcatgggggcggtgcctgtcaggacaagg 2811
||||||||||||||||||||||||||||||||||||
Sbjct: 421 aagaaatgcatgggggcggtgcctgtcaggacaagg 456
>BF01032B1D01
Length = 784
Score = 387 bits (195), Expect = e-107
Identities = 195/195 (100%)
Strand = Plus / Minus
Query: 658 aggccagtgaaggcttactggccagtgtcggcggtgtggaggccgcggatgccgcggcgc 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 aggccagtgaaggcttactggccagtgtcggcggtgtggaggccgcggatgccgcggcgc 530
Query: 718 gggcaggcttgctgttgttgctggcgtctcctgtcgccgtcccgtccccggcgatgacca 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gggcaggcttgctgttgttgctggcgtctcctgtcgccgtcccgtccccggcgatgacca 470
Query: 778 tcgcctccaccgagccggaccatcccttgtcagcagctcttgaattttatccacgatatg 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 tcgcctccaccgagccggaccatcccttgtcagcagctcttgaattttatccacgatatg 410
Query: 838 atgttctcgcagagg 852
|||||||||||||||
Sbjct: 409 atgttctcgcagagg 395
Score = 313 bits (158), Expect = 1e-84
Identities = 158/158 (100%)
Strand = Plus / Minus
Query: 850 aggcctgcgcagctctgtgtgaagcgaaaggttggaagcacgccgtgttactgcacgacg 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aggcctgcgcagctctgtgtgaagcgaaaggttggaagcacgccgtgttactgcacgacg 253
Query: 910 gaagcggcagcgcggcgccgctcatagtgcccgatcacgacaccctcgcgctccgtgtcc 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gaagcggcagcgcggcgccgctcatagtgcccgatcacgacaccctcgcgctccgtgtcc 193
Query: 970 gccagctgccctcgagagaggacgacgacgccttgagg 1007
||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gccagctgccctcgagagaggacgacgacgccttgagg 155
Score = 178 bits (90), Expect = 4e-44
Identities = 90/90 (100%)
Strand = Plus / Minus
Query: 1005 aggaatcttctcctcgtactgaagaagttcggtgctgtaaactttatcgtatggtgttcg 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 aggaatcttctcctcgtactgaagaagttcggtgctgtaaactttatcgtatggtgttcg 40
Query: 1065 gcggagtgctcggtgcgagtgctggacgcg 1094
||||||||||||||||||||||||||||||
Sbjct: 39 gcggagtgctcggtgcgagtgctggacgcg 10
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 307,634
Number of extensions: 5180
Number of successful extensions: 5180
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5180
Number of HSP's successfully gapped: 4
Length of query: 3769
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3751
Effective length of database: 8,109,745
Effective search space: 30419653495
Effective search space used: 30419653495
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)