BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05845 (UTR included)
(2026 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1198_C1 2498 0.0
>BF14_1198_C1
Length = 1396
Score = 2498 bits (1260), Expect = 0.0
Identities = 1266/1268 (99%)
Strand = Plus / Plus
Query: 493 gggttacaatgaaaattttactcgtattatgtgctgtggtggcggctggcactgccgtca 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gggttacaatgaaaattttactcgtattatgtgctgtggtggcggctggcactgccgtca 162
Query: 553 gcttcttcgacctcgtccgcgaggagtggaacacctttaagctagagcacaagaagcagt 612
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 gcttcttcgacctcgtccgcgaggagtggaacacctttaagctagagcacaagaagcagt 222
Query: 613 acgacagcgagacggaggagaagttccgtatgaagatatacgcggagaacaaacacaagg 672
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 acgacagcgagacggaggagaagttccgtatgaagatatacgcggagaacaaacacaagg 282
Query: 673 tcgccaaacacaaccagcggtaccagaagggtctggtctcctacaggctgaagacgaaca 732
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 tcgccaaacacaaccagcggtaccagaagggtctggtctcctacaggctgaagacgaaca 342
Query: 733 agtactccgacatgctgcaccacgagttcgtcaacaccatgaacggattcaacaagaccg 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 agtactccgacatgctgcaccacgagttcgtcaacaccatgaacggattcaacaagaccg 402
Query: 793 tgaaacacaacaaggggctgtacgcgaagggtaacgatatccgcggggccactttcgtgt 852
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tgaaacacaacaaggggctgtacgcgaagggtaacgatatccgcggggccactttcgtgt 462
Query: 853 ccccggccaacgtggcggcgcctcccaccgtggactggaggcagcacggagccgtcaccc 912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 ccccggccaacgtggcggcgcctcccaccgtggactggaggcagcacggagccgtcaccc 522
Query: 913 ccgtcaaggaccagggcaaatgtggatcatgctggtcgttctctaccacgggagcactgg 972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ccgtcaaggaccagggcaaatgtggatcatgctggtcgttctctaccacgggagcactgg 582
Query: 973 agggccaacacttccgtaagagcggcttcctggtgtctctctcggagcagaacctcatcg 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 agggccaacacttccgtaagagcggcttcctggtgtctctctcggagcagaacctcatcg 642
Query: 1033 actgctcctccgcgtacggaaacaacggatgtaacggcggcctcatggacaacgccttca 1092
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 actgctcctccgcgtacggaaacaacggatgtaacggcggcctcatggacaacgccttca 702
Query: 1093 agtacatcaaggacaacgacggcatcgacaccgagaagacctacccctacgaggccgtgg 1152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 agtacatcaaggacaacgacggcatcgacaccgagaagacctacccctacgaggccgtgg 762
Query: 1153 acgacaagtgcaggtacaaccccaagaactcgggcgccgaggacgtgggcttcgtggaca 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 acgacaagtgcaggtacaaccccaagaactcgggcgccgaggacgtgggcttcgtggaca 822
Query: 1213 tccccgccggagacgagcacaagctgatgctggcgctggccaccgtgggacccgtgtccg 1272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 tccccgccggagacgagcacaagctgatgctggcgctggccaccgtgggacccgtgtccg 882
Query: 1273 tcgccatagacgcgagccaggagtccttccagctctactctgacggcgtctactacgacg 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 tcgccatagacgcgagccaggagtccttccagctctactctgacggcgtctactacgacg 942
Query: 1333 agaactgctcctccgaaaacctcgaccatggagtgttggtggtgggttacggcacggacg 1392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 agaactgctcctccgaaaacctcgaccatggagtgttggtggtgggttacggcacggacg 1002
Query: 1393 aggacggcggcgactactggctggtgaagaactcgtgggggccgtcctggggagacgagg 1452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 aggacggcggcgactactggctggtgaagaactcgtgggggccgtcctggggagacgagg 1062
Query: 1453 gctacatcaagatggcccgcaacagagacaaccactgcggcatcgcctcctccgcctcct 1512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 gctacatcaagatggcccgcaacagagacaaccactgcggcatcgcctcctccgcctcct 1122
Query: 1513 acccgctcgtgtaggcgacgggcggaggagcgtcatatttagagagactcattagttcag 1572
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||
Sbjct: 1123 acccgctcgtgtaggcgacgggcggaggagcttcatatatagagagactcattagttcag 1182
Query: 1573 gcgctctgtatccttagcacaagtcctcgtcctcaagcgtctccggtcacctccactcat 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 gcgctctgtatccttagcacaagtcctcgtcctcaagcgtctccggtcacctccactcat 1242
Query: 1633 gaatactctcacacgttagtatggacggcccgggacttgtggtgggaggtagggcgcgtt 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 gaatactctcacacgttagtatggacggcccgggacttgtggtgggaggtagggcgcgtt 1302
Query: 1693 gtaaagtgcgtgtgatacatagggtaatgtaatgtaagaataaataaataaataaataaa 1752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 gtaaagtgcgtgtgatacatagggtaatgtaatgtaagaataaataaataaataaataaa 1362
Query: 1753 tattttaa 1760
||||||||
Sbjct: 1363 tattttaa 1370
Score = 153 bits (77), Expect = 1e-36
Identities = 97/103 (94%), Gaps = 3/103 (2%)
Strand = Plus / Plus
Query: 23 agattttaacacgtaacaaagttataatatccgcgtctcctt---agtgcgtttaatttt 79
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 1 agattttaacacgtaacaaagttataatatccgcgtctccttcttagtgcatttaatttt 60
Query: 80 ttaattctatgttttaaatacaaataaaaaagaggacaaaaag 122
|||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 61 ttaattgtatgttttaaatacaaataaaaaagaggactaaaag 103
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 219,969
Number of extensions: 5389
Number of successful extensions: 5389
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5380
Number of HSP's successfully gapped: 2
Length of query: 2026
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2009
Effective length of database: 8,119,229
Effective search space: 16311531061
Effective search space used: 16311531061
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)