BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05852 (UTR included)
(1163 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01051B2B07 1318 0.0
>BF01051B2B07
Length = 785
Score = 1318 bits (665), Expect = 0.0
Identities = 680/685 (99%)
Strand = Plus / Plus
Query: 304 cttctctgtttgagtttctgcgtgttgcttaaatatttcatcttttattatttttactag 363
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 cttctccgtttgagtttctgcgtgttgcttaaatatttcatcttttattatttttactag 72
Query: 364 acgtatttattaatcagacgtaacgtaaacatgttgtggtgtgatatgatatgtcgctcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 acgtatttattaatcagacgtaacgtaaacatgttgtggtgtgatatgatatgtcgctcc 132
Query: 424 ctataaatagattctgatttagatggtacttcgtagtttagtctagtgatggtagatcag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ctataaatagattctgatttagatggtacttcgtagtttagtctagtgatggtagatcag 192
Query: 484 acattttaaaaaacaaaatgggacgacgagaggaaccagcttggacgaaggggactgtcg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 acattttaaaaaacaaaatgggacgacgagaggaaccagcttggacgaaggggactgtcg 252
Query: 544 ggttgaccgtcgctcgtgagcgcggtgatgtaggccggaaattccagaaccgtctgactg 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggttgaccgtcgctcgtgagcgcggtgatgtaggccggaaattccagaaccgtctgactg 312
Query: 604 ttactaggagtatgatcgaaagattaggtcttgaaaaagaactccacggccatatgggat 663
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttactaggagtatgatagaaagattaggtcttgaaaaagaactccacggccatatgggat 372
Query: 664 gtgttaattgtctggaatggaacgtcgacggatctatattggcgtcggcatccgatgatc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 gtgttaattgtctggaatggaacgtcgacggatctatattggcgtcggcatccgatgatc 432
Query: 724 tccatgttattctgtgggatccgtatagatacaagcagatcagtaatatctcgaccggac 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tccatgttattctgtgggatccgtatagatacaagcagatcagtaatatctcgaccggac 492
Query: 784 acacggggaacatattctctgttaagtttctctctcgggactccctggctacctgtgccg 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 acacggggaacatattctctgttaagtttctctctcgggactccctggctacctgtgccg 552
Query: 844 ctgatagttccgtgcgtgttcgtagcctttcaacgggggcgtctttgttggaatgtggat 903
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 553 ctgatagttcggtgcgtgttcgtagcctttcaacgggggcgtccttgttggaatgtggat 612
Query: 904 gtcactgtggccgtgtcaagagactcgcgagtgtaccagacggtaccgacgtattctggt 963
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 gtcactgtggtcgtgtcaagagactcgcgagtgtaccagacggtaccgacgtattctggt 672
Query: 964 ctgcgggcgaagacggattagttct 988
|||||||||||||||||||||||||
Sbjct: 673 ctgcgggcgaagacggattagttct 697
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 135,235
Number of extensions: 2638
Number of successful extensions: 2638
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 2638
Number of HSP's successfully gapped: 1
Length of query: 1163
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1146
Effective length of database: 8,119,229
Effective search space: 9304636434
Effective search space used: 9304636434
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)