BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05871 (UTR included)
(4351 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_3174_C1 2468 0.0
>BF14_3174_C1
Length = 1385
Score = 2468 bits (1245), Expect = 0.0
Identities = 1259/1263 (99%), Gaps = 2/1263 (0%)
Strand = Plus / Plus
Query: 3089 ggagcgcaagatgtcggaggagcagctgtcgttctcgttcgaatccatcccccggggccg 3148
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 ggagcgcaagatgtcggaggagcagctgtncttctcgttcgaatccatcccccggggccg 60
Query: 3149 cggcggggacggggactccggccggccttacgacgacaaccgcgtcagactgcaccccac 3208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggcggggacggggactccggccggccttacgacgacaaccgcgtcagactgcaccccac 120
Query: 3209 ggccgccaacccgcaagggtacatcgacgcatcgcacatcacaatgacggtgggaggttc 3268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggccgccaacccgcaagggtacatcgacgcatcgcacatcacaatgacggtgggaggttc 180
Query: 3269 ccagcggttctacgtggtggtccaggcgaacagcggcgagcaggcggccctgctctggga 3328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccagcggttctacgtggtggtccaggcgaacagcggcgagcaggcggccctgctctggga 240
Query: 3329 gtgcgtgtggcaggtcggcgccagggtgctggcactcgcggatggccagcagccgcgcta 3388
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtgcgtgtggcaggtcggcgccagggtgctggcactcgcggatggccagcagccgcgcta 300
Query: 3389 cctgccgcaggaccagcggaccatcacctacggacagttcgaggtgtggtgcggcgcgtg 3448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cctgccgcaggaccagcggaccatcacctacggacagttcgaggtgtggtgcggcgcgtg 360
Query: 3449 gtcgtgcacgtcgtggggcgggtcgcgccgggtcacggtgcggagaggcgccggcccgcc 3508
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtcgtgcacgtcgtggggcgggtcgcgccgggtcacggtgcggagaggcgccggcccgcc 420
Query: 3509 caggacgctctggcacgtccgctgtggctggcccgcagacaccaccggcttcctggactt 3568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caggacgctctggcacgtccgctgtggctggcccgcagacaccaccggcttcctggactt 480
Query: 3569 catatcggagatcaacagtctccgtgagacgtgcgaggcggaggcggcggccgagcgctc 3628
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 catatcggagatcaacagtctccgtgagacgtgcgaggcggaggcggcggccgagcgctc 540
Query: 3629 cctgaccctgaacgcgccgctcgtgctgggagggcgcgccgccggcgtcacgctggccgc 3688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cctgaccctgaacgcgccgctcgtgctgggagggcgcgccgccggcgtcacgctggccgc 600
Query: 3689 ggacctgctgctgcacgtcatcgacaccaaccaggagctggacatccctcgcaccgtatc 3748
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ggacctgctgctgcacgtcatcgacaccaaccaggagctggacatccctcgcaccgtatc 660
Query: 3749 gttgctgcaccagcagcgcgccggcctgctgccgagcctgcagcactaccgcttcctgca 3808
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gttgctgcaccagcagcgcgccggcctgctgccgagcctgcagcactaccgcttcctgca 720
Query: 3809 cctggtgctgctccactacctcaagcagtcccgcctcatatgacacgcgccacgtgctcg 3868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 cctggtgctgctccactacctcaagcagtcccgcctcatatgacacgcgccacgtgctcg 780
Query: 3869 acaacgacgactcctgtttatagtcattctgttaaaacgttataaattggcggagtcgat 3928
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 acaacgacgactcctgtttatagtcattctgttaaaacgttataaattggcggagtcgat 840
Query: 3929 aatcgaagttactattccctcgaaaatattaggacgagctgaagctcgctcgagtgaagc 3988
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aatcgaagttactattccctcgaaaatattaggacgagctgaagctcgctcgagtgaagc 900
Query: 3989 ttccatggggtcattgacccgtcgcgatgtttgtatattctgtatttatatttcgttgtt 4048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ttccatggggtcattgacccgtcgcgatgtttgtatattctgtatttatatttcgttgtt 960
Query: 4049 gtacatttaactgttaagtgttccacaccgcaacaagtatcgagactgagagtccgagcc 4108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 gtacatttaactgttaagtgttccacaccgcaacaagtatcgagactgagagtccgagcc 1020
Query: 4109 ctaggtcataggtggtaggttaagcgacactgtgccttacgtcggagattattcgatctg 4168
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1021 ctaggtcataggtggtaggttaagcg--actgtgccttacgtcggagattattcgatctg 1078
Query: 4169 aatctgtgtgccttatcttagactttttttatttttgtacttgtgagagccgagtggagt 4228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 aatctgtgtgccttatcttagactttttttatttttgtacttgtgagagccgagtggagt 1138
Query: 4229 gcgccttccagtattcgggcgtgcggaacagttttctatgtctctatagacctcgttccg 4288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1139 gcgccttccagtattcgggcgtgcggaacagttttctatgtctctatagacctcgttccg 1198
Query: 4289 tgggtgcggcgatgtgttcatactcttaatgtactctgatctagtccaacgacagcttcg 4348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 tgggtgcggcgatgtgttcatactcttaatgtactctgatctagtccaacgacagcttcg 1258
Query: 4349 tac 4351
|||
Sbjct: 1259 tac 1261
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 318,654
Number of extensions: 5824
Number of successful extensions: 5824
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5823
Number of HSP's successfully gapped: 1
Length of query: 4351
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4333
Effective length of database: 8,109,745
Effective search space: 35139525085
Effective search space used: 35139525085
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)