BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05873 (UTR included)
(3940 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A1G03 1518 0.0
>BF01017A1G03
Length = 789
Score = 1518 bits (766), Expect = 0.0
Identities = 776/780 (99%)
Strand = Plus / Plus
Query: 2351 gtccacagttatattgcccgggacacattctaaggagataaactgtttgagaacgtaccg 2410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10 gtccacagttatattgcccgggacacattctaaggagataaactgtttgagaacgtaccg 69
Query: 2411 ccgtcgtaacgacgacccagtcacgtggttcataacaggaggagaggacaccacactgag 2470
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 ccgtcgtgacgacgacccagtcacgtggttcataacaggaggagaggacaccacactgag 129
Query: 2471 agtgtccacgtcagaacaggaagcggagttctgggaccgagtgatcttcagacatctgtc 2530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 agtgtccacgtcagaacaggaagcggagttctgggaccgagtgatcttcagacatctgtc 189
Query: 2531 gaacgtacgggcgttgaaactgttgagtgtgtcccatgacgaagtgttggtggtgtcggc 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gaacgtacgggcgttgaaactgttgagtgtgtcccatgacgaagtgttggtggtgtcggc 249
Query: 2591 gggaggcagggcgcaaatatgtatcagaaccatcggcttcgttgataagaatgtaacggc 2650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gggaggcagggcgcaaatatgtatcagaaccatcggcttcgttgataagaatgtaacggc 309
Query: 2651 ggaggaactcattgactatcagataaaaggaacagacagggaaagaaggggaaaccaaaa 2710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ggaggaactcattgactatcagataaaaggaacagacagggaaagaaggggaaaccaaaa 369
Query: 2711 ctggagaaactgttccgtagacttcgacccggagaccaggatcatggatgtggaagtgga 2770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ctggagaaactgttccgtagacttcgacccggagaccaggatcatggatgtggaagtgga 429
Query: 2771 cgaactgaatgaagctaaagtcatgatatacacggcgtgctctgacggtgaggtccgggt 2830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cgaactgaatgaagctaaagtcatgatatacacggcgtgctctgacggtgaggtccgggt 489
Query: 2831 cttcgagtggaacagacgcggtggacagttcactatgatccaggaagtcaggcatcacaa 2890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 cttcgagtggaacagacgcggtggacagttcactatgatccaggaagtcaggcatcacaa 549
Query: 2891 aacctgtatactgaaactgaagatgtttacatgctctaataaaaaaataataactacgtg 2950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 aacctgtatactgaaactgaagatgtttacatgctctaataaaaaaataataactacgtg 609
Query: 2951 cgggacccgaggagacgtggccttttgggaggtcagctcagaggacgggacactggcgga 3010
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 cgggacccgaggagacgtggccttttgggaggtcagctcagaggacgggacactggcgga 669
Query: 3011 gggaccggctctcgtcctcaggaccaacgaatcggggatcaatagtgtcgacattaaagt 3070
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gggaccggctctcgtcctcaggaccaacgaatcggggatcaatagtgtcgacattaaagt 729
Query: 3071 gaccggaggctgtcaattcgtgttggcgaccggcggagatgataacgcggtccatatgag 3130
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 730 gaccggaggctgtcaattcgtgttggcgaccggcggnnatgataacgctgtccatatgag 789
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 389,103
Number of extensions: 7150
Number of successful extensions: 7150
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7150
Number of HSP's successfully gapped: 1
Length of query: 3940
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3922
Effective length of database: 8,109,745
Effective search space: 31806419890
Effective search space used: 31806419890
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)