BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05877 (UTR included)
(1753 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01041A1E11 940 0.0
>BF01041A1E11
Length = 767
Score = 940 bits (474), Expect = 0.0
Identities = 477/478 (99%)
Strand = Plus / Plus
Query: 353 ataaataaatgttttactcgttgaacttttgctaaaatatataattcttgaagtgccctt 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ataaataaatgttttactcgttgaacttttgctaaaatatataattcttgaagtgccctt 60
Query: 413 gtgcaacaaaagtctattttataaaattagtaagggagataaatttgttaacaaacgtcg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgcaacaaaagtctattttataaaattagtaagggagataaatttgttaacaaacgtcg 120
Query: 473 tacacccactgaatagttacaataaaacatgggcttgtctcgttgctactcattgatgaa 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacacccactgaatagttacaataaaacatgggcttgtctcgttgctactcattgatgaa 180
Query: 533 gtgtttgctgataatatttaatataatattccttctggtaggtgtgggtgcgtgcgtgtt 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtgtttgctgataatatttaatataatattccttctggtaggtgtgggtgcgtgcgtgtt 240
Query: 593 ctccggctgggcgctttgggacgggcgcggctcggagaccagtgcgggcagggcggggct 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctccggctgggcgctttgggacgggcgcggctcggagaccagtgcgggcagggcggggct 300
Query: 653 ctgcgcgctggtcgcctgggccgccgtcctcacgctgggagccctggctgcgctggcagg 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgcgcgctggtcgcctgggccgccgtcctcacgctgggagccctggctgcgctggcagg 360
Query: 713 tgccattcgtggttcggcgtccctgttggcgggggccttcgcacttctggcattgagcgc 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgccattcgtggttcggcgtccctgttggcgggggccttcgcacttctggcattgagcgc 420
Query: 773 cctagccgaaggtggcgcggcgtggtggggcgcagctcactccgcacacctcacacag 830
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gctagccgaaggtggcgcggcgtggtggggcgcagctcactccgcacacctcacacag 478
Score = 398 bits (201), Expect = e-110
Identities = 211/216 (97%)
Strand = Plus / Plus
Query: 827 acagatgttgcgagaccgcctgagacacacgctgacacacgactacggcgtcctgcccgc 886
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 acagatgttgcgagaccgcctgagacacacgctgacacacgactacggcgtcctgcccgc 611
Query: 887 gaggacacagatgttggacgccatacagcacgggctgcagtgttgcggtgcggagagcac 946
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 gaggacacagatgttggacgccatacagcacgggctgcagtgttgcggtgcggagagcac 671
Query: 947 acgggactggcaacacgcggcttggggtggaggcttggagcgcgatcggtcgggcgagac 1006
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 672 acgggactggcaacacgcggctnnnnntggaggcttggagcgcgatcggtcgggcgagac 731
Query: 1007 catcgacctgagcgtgcgcgcgccagccgcttacta 1042
||||||||||||||||||||||||||||||||||||
Sbjct: 732 catcgacctgagcgtgcgcgcgccagccgcttacta 767
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 204,339
Number of extensions: 5028
Number of successful extensions: 5028
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5027
Number of HSP's successfully gapped: 2
Length of query: 1753
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1736
Effective length of database: 8,119,229
Effective search space: 14094981544
Effective search space used: 14094981544
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)