BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05895 (UTR included)
(1399 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01015B2F08 946 0.0
BF14_2337_C1 585 e-167
>BF01015B2F08
Length = 520
Score = 946 bits (477), Expect = 0.0
Identities = 511/521 (98%), Gaps = 1/521 (0%)
Strand = Plus / Minus
Query: 843 gttttcattatcacactcaacacggacagtttggagttgtacgtcgaaaatgaataaaga 902
|||||||||||||||||||||||||||||||| ||||||||||| |||||| ||| ||||
Sbjct: 520 gttttcattatcacactcaacacggacagtttagagttgtacgtggaaaataaattaaga 461
Query: 903 agataattaataattatgaataagtcccttctgtgtataattttaaagtaattcacgctc 962
|||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||
Sbjct: 460 tgataattaataattatgaataagtcctttctctgtataattttaacgtaattcacgctc 401
Query: 963 tatgatagacgaaaaactgcaaactgtccgtttttagtataacgaagctaaatcgtggat 1022
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 tatgatagacgaaaaactgcaaactgtccgtttttagtataacgaagctaaatcgtggat 341
Query: 1023 tagttcatctttgtgtcgaatttttgcactacaatatcatgactagatatttataaatat 1082
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tagt-catctttgtgtcgaatttttgcactacaatatcatgactagatatttataaatat 282
Query: 1083 atatattatacattaaaaccaataatttaaataaccaatataaacattaaaaaccattat 1142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atatattatacattaaaaccaataatttaaataaccaatataaacattaaaaaccattat 222
Query: 1143 ctctttgactatattcctgcgaggagtcttatctacacttgctcgattatgtccaatagg 1202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 ctctttgactatattcctgcgaggagtcttatctacacttgctcgattatgtccaatagg 162
Query: 1203 aaaggaataatttaacagctctcagactataatccaaagatgaaaaaactcatcaataca 1262
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 161 aaaggaataatttaacagctctcagactataatccaaagatgaaaaaacttatcaataca 102
Query: 1263 taaaacctttggcttataatctatgaaaacaacttctcacttatttaactcttgtactat 1322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 taaaacctttggcttataatctatgaaaacaacttctcacttatttaactcttgtactat 42
Query: 1323 gatgctattgtaaaatctcatcaacatattaattaaacctt 1363
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 41 gatgctattgtaaaatctcatcaacatattaattaaacctt 1
>BF14_2337_C1
Length = 725
Score = 585 bits (295), Expect = e-167
Identities = 310/315 (98%)
Strand = Plus / Plus
Query: 519 gagttcagggaatgcttctatttattcgcccgttccggccagatcacatctctggatgag 578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gagttcagggaatgcttctatttattcgcccgttccggccagatcacatctctggatgag 162
Query: 579 ctcacggttgtcatgaggtctttgggaatgagtccgacaatacaggaactgacgggttac 638
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ctcacggtcgtcatgaggtctttgggaatgagtccgacaatacaggaactgacgggttac 222
Query: 639 ttgaagggtaagggtggtaaaatgtcatttgccgacttccttgaggtgatgcacatacat 698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttgaagggtaagggtggtaaaatgtcatttgccgacttccttgaggtgatgcacatacat 282
Query: 699 tccagagccgagaacctgcctcatgaggtggtagatgcgtttagagctggtgattcagaa 758
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 283 tccagagccgagaacctgcctcatgaggtggtagatgcgtttagagctggtgattcggat 342
Query: 759 cgcagaggagtcatcccggcccgtcagttgaggcacttactgcagaactggggagaggga 818
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 343 cgcagaggagtcatcccggcccgccagttgagacacttactgcagaactggggagaggga 402
Query: 819 ttatcctccagggag 833
|||||||||||||||
Sbjct: 403 ttatcctccagggag 417
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 224,089
Number of extensions: 6274
Number of successful extensions: 6274
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6273
Number of HSP's successfully gapped: 2
Length of query: 1399
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1382
Effective length of database: 8,119,229
Effective search space: 11220774478
Effective search space used: 11220774478
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)