BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05906 (UTR included)
(1291 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_335_C2 204 3e-52
BF14_335_C4 127 5e-29
BF01019A1H08 111 3e-24
BF01043B1E03 107 4e-23
BF01016B1E06 107 4e-23
BF01049B1F01 107 4e-23
BF14_335_C5 103 7e-22
BF01014B2F02 78 4e-14
BF01048A1E04 76 2e-13
BF01021A2B11 74 6e-13
BF01044B2F11 72 2e-12
BF01017A1F03 70 1e-11
>BF14_335_C2
Length = 1827
Score = 204 bits (103), Expect = 3e-52
Identities = 256/304 (84%), Gaps = 6/304 (1%)
Strand = Plus / Minus
Query: 713 gagatgtataacagccaaatctttctacaacctacgcaaagactttggcccgtccggaac 772
|||| |||||||||| |||||| |||||| ||||| ||| |||| |||| |||| ||||
Sbjct: 1107 gagaggtataacagctaaatctctctacagcctactaaaatacttgggcctgtccagaac 1048
Query: 773 taacatgagttcattctaggaacgtgcgtagaaggcagccctgataggtttgtttcaaat 832
||||| |||||||||| |||||| | | |||| |||| || |||||| |||||||||
Sbjct: 1047 taacaccagttcattcttcgaacgtacttcgaagacagctctagtaggttcgtttcaaat 988
Query: 833 ttggttaggtagagagaggagcttggacggtggaggtgagcgtttagt--gggcgttaga 890
|||||||| ||||||||||||||||||||||||||||||||| || | | ||||||
Sbjct: 987 ttggttag---gagagaggagcttggacggtggaggtgagcgttatgtacgcgagttaga 931
Query: 891 tagggac-cttaaatctaaacctgggtaacaagtcccaggtactggtgaagctcctctcc 949
||||| | |||||| ||| ||||| || ||| ||||||| |||| ||||||||||||||
Sbjct: 930 taggggctcttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctcc 871
Query: 950 ctacaacgcgatgaacccggcacccacacgatgaatccacagaaagctaagaggtttcgt 1009
|| ||||||| | ||||||||||| |||| |||||||| ||||||||||||||||||||
Sbjct: 870 ctgcaacgcggcggacccggcacccgcacggtgaatccatagaaagctaagaggtttcgt 811
Query: 1010 ctct 1013
||||
Sbjct: 810 ctct 807
>BF14_335_C4
Length = 1491
Score = 127 bits (64), Expect = 5e-29
Identities = 191/231 (82%), Gaps = 3/231 (1%)
Strand = Plus / Plus
Query: 784 cattctaggaacgtgcgtagaaggcagccctgataggtttgtttcaaatttggttaggta 843
|||||| |||||||| || ||||||||||| ||| | | |||| |||||||||||||
Sbjct: 1135 cattcttggaacgtgagtctaaggcagccctagcaggatcgattcatatttggttaggta 1194
Query: 844 gagagaggagcttggacggtggaggtgagcgtttagtgggcgttagat--agggacctta 901
|||||||||||||||| || |||||||||||||| || |||| |||| ||| |||||
Sbjct: 1195 gagagaggagcttggaaagttgaggtgagcgtttaatgcgcgtaagataaaggcccctta 1254
Query: 902 aatctaaacctgggtaacaagtcccaggtactggtgaagctcctctccctacaacgcgat 961
|| ||| |||||||| ||||||||||| |||| |||||||||||| ||| |||||||||
Sbjct: 1255 aacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgcaacgcgat 1313
Query: 962 gaacccggcacccacacgatgaatccacagaaagctaagaggtttcgtctc 1012
| ||| ||| || |||| |||||||| ||| ||| |||| |||||||||
Sbjct: 1314 ggtccccgcaaccgcacggtgaatccatggaatgctgagagttttcgtctc 1364
>BF01019A1H08
Length = 504
Score = 111 bits (56), Expect = 3e-24
Identities = 101/116 (87%)
Strand = Plus / Minus
Query: 897 ccttaaatctaaacctgggtaacaagtcccaggtactggtgaagctcctctccctacaac 956
||||||| ||| |||||||| ||| ||||||| |||| |||||||||||||||| ||||
Sbjct: 479 ccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcctctccctgcaac 420
Query: 957 gcgatgaacccggcacccacacgatgaatccacagaaagctaagaggtttcgtctc 1012
|||||| ||||||||||| |||| |||||||| ||| ||||||||||||| ||||
Sbjct: 419 gcgatggacccggcacccgcacggtgaatccattgaatgctaagaggtttcatctc 364
>BF01043B1E03
Length = 830
Score = 107 bits (54), Expect = 4e-23
Identities = 99/113 (87%), Gaps = 2/113 (1%)
Strand = Plus / Plus
Query: 817 taggtttgtttcaaatttggttaggtagagagaggagcttggacggtggaggtgagcgtt 876
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |
Sbjct: 312 taggtttgtttcaaatttggttaggtagagagaggaccttggacagtggaggtgagcact 371
Query: 877 tagtgggcgttagatagggacc--ttaaatctaaacctgggtaacaagtccca 927
|| | ||||||||||||| || ||||| ||| |||||||| |||||||||
Sbjct: 372 taacgcgcgttagataggggccctttaaacctatacctgggttgcaagtccca 424
>BF01016B1E06
Length = 606
Score = 107 bits (54), Expect = 4e-23
Identities = 109/125 (87%), Gaps = 3/125 (2%)
Strand = Plus / Minus
Query: 825 tttcaaatttggttaggtagagagaggagcttggacggtggaggtgagcgtttagtgggc 884
||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 323 tttcaaatttggttaggtagagagaggagattggacggtggaggtgagcgttta--acgc 266
Query: 885 gttagataggg-accttaaatctaaacctgggtaacaagtcccaggtactggtgaagctc 943
||||||||||| ||||||| ||| |||||||| | | |||| || |||| ||||||||
Sbjct: 265 gttagatagggccccttaaacctacacctgggtcgctactccccggcactgttgaagctc 206
Query: 944 ctctc 948
|||||
Sbjct: 205 ctctc 201
>BF01049B1F01
Length = 840
Score = 107 bits (54), Expect = 4e-23
Identities = 106/122 (86%), Gaps = 1/122 (0%)
Strand = Plus / Minus
Query: 837 ttaggtagagagaggagcttggacggtggaggtgagcgtttagtgggcgttagataggg- 895
||||||||||||||||||||||||||| |||||| | ||||| ||| |||||||||||
Sbjct: 708 ttaggtagagagaggagcttggacggtagaggtgggtgtttaacgggagttagatagggc 649
Query: 896 accttaaatctaaacctgggtaacaagtcccaggtactggtgaagctcctctccctacaa 955
||||| | ||| |||||||| ||||||||||| |||| |||||||||||||||| |||
Sbjct: 648 cccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgcaa 589
Query: 956 cg 957
||
Sbjct: 588 cg 587
>BF14_335_C5
Length = 1597
Score = 103 bits (52), Expect = 7e-22
Identities = 128/153 (83%), Gaps = 4/153 (2%)
Strand = Plus / Plus
Query: 839 aggtagagagaggagcttggacggtggaggtgagcgtttagtgggcgttagataggg--a 896
|||||||||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct: 1438 aggtagagagaggagcttggacggtggaggtgagcgtttaatgcgcgttagacaggggcg 1497
Query: 897 ccttaaatctaaacctgggtaacaagtcccaggtactggtgaagctcctctccctacaac 956
||||||| ||| || | ||||||||||| |||| |||||||||||||| | |||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaa- 1556
Query: 957 gcgatgaacccggcacccacacgatgaatccac 989
|||| ||||||||||| |||| |||||||||
Sbjct: 1557 -agatgcacccggcacccgcacggtgaatccac 1588
>BF01014B2F02
Length = 623
Score = 77.8 bits (39), Expect = 4e-14
Identities = 90/106 (84%), Gaps = 2/106 (1%)
Strand = Plus / Minus
Query: 909 acctgggtaacaagtcccaggtactggtgaagctcctctccctacaacgcgatgaacccg 968
|||||||| ||||||| ||| ||| |||||||||||||||| |||||| || |||||
Sbjct: 620 acctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggacccg 563
Query: 969 gcacccacacgatgaatccacagaaagctaagaggtttcgtctcta 1014
|||||| |||| || |||||| ||| ||| ||||||||||||||||
Sbjct: 562 gcacccgcacggtgcatccactgaatgctgagaggtttcgtctcta 517
>BF01048A1E04
Length = 789
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 954 aacgcgatgaacccggcacccacacgatgaatccacagaaagctaagaggtttcgtctct 1013
||||||||| ||||||||||| |||| |||||||| ||||| |||||||||||||||||
Sbjct: 1 aacgcgatggacccggcacccgcacggtgaatccatggaaagataagaggtttcgtctct 60
Query: 1014 aa 1015
||
Sbjct: 61 aa 62
>BF01021A2B11
Length = 729
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/52 (94%), Gaps = 2/52 (3%)
Strand = Plus / Plus
Query: 827 tcaaatttggttaggtagagagaggagcttggacggtggaggtgagcgttta 878
||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 357 tcaaatttggttaggaagag--aggagcttggacggtggaggtgagcgttta 406
>BF01044B2F11
Length = 728
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 835 ggttaggtagagagaggagcttggacggtggaggtgagcgttta 878
|||||| ||||||||||||||||||| |||||||||||||||||
Sbjct: 586 ggttagatagagagaggagcttggacagtggaggtgagcgttta 629
>BF01017A1F03
Length = 782
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 824 gtttcaaatttggttaggtagagagaggagcttggacggtggaggtgagcgttta 878
||||| || |||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 190 gtttctaagttggttagatagagagaggagcttccacggtggaggtgagcgttta 244
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 170,098
Number of extensions: 3863
Number of successful extensions: 3863
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 3855
Number of HSP's successfully gapped: 13
Length of query: 1291
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1274
Effective length of database: 8,119,229
Effective search space: 10343897746
Effective search space used: 10343897746
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)