BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05923 (UTR included)
(2023 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01037B1H08 129 2e-29
BF01056B1D02 100 2e-20
BF01023A2A12 100 2e-20
BF01010B2F09 86 3e-16
BF01029B2F12 80 2e-14
>BF01037B1H08
Length = 758
Score = 129 bits (65), Expect = 2e-29
Identities = 99/109 (90%), Gaps = 1/109 (0%)
Strand = Plus / Plus
Query: 432 tggcctgaaggttaaaaggcatgcctctcatacgtgtgggcgcgggttcgaaatctggca 491
||||||| |||||||| ||| |||||||||||||| ||||||||||||||| ||||||
Sbjct: 78 tggcctggaggttaaa-ggcccgcctctcatacgtgaaggcgcgggttcgaaacctggca 136
Query: 492 agtatcaatatgatcttttccgagtcatatgtactttctaagagtattt 540
|||| |||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 137 agtaccaatgtgatcttttccgagtcatatgtactttctaagaatattt 185
>BF01056B1D02
Length = 778
Score = 99.6 bits (50), Expect = 2e-20
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 463 acgtgtgggcgcgggttcgaaatctggcaagtatcaatatgatcttttccgagtcatatg 522
||||| ||||||||||| |||| |||||||||| |||| |||||||||||||||||||||
Sbjct: 493 acgtgagggcgcgggtt-gaaacctggcaagtaccaatgtgatcttttccgagtcatatg 551
Query: 523 tactttctaagagtatttggacacca 548
||||||||||| ||| || |||||||
Sbjct: 552 tactttctaagggtagttagacacca 577
>BF01023A2A12
Length = 723
Score = 99.6 bits (50), Expect = 2e-20
Identities = 78/86 (90%), Gaps = 1/86 (1%)
Strand = Plus / Plus
Query: 463 acgtgtgggcgcgggttcgaaatctggcaagtatcaatatgatcttttccgagtcatatg 522
||||| ||||||||||| |||| |||||||||| |||| ||||||||||||||||| |||
Sbjct: 88 acgtgagggcgcgggtt-gaaacctggcaagtaccaatgtgatcttttccgagtcacatg 146
Query: 523 tactttctaagagtatttggacacca 548
|||||||||| ||||||| |||||||
Sbjct: 147 tactttctaacagtatttagacacca 172
>BF01010B2F09
Length = 764
Score = 85.7 bits (43), Expect = 3e-16
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 454 gcctctcatacgtgtgggcgcgggttcgaaatctggcaagtatcaatatgatcttttccg 513
|||||||| ||||| | ||||||||||||| ||| |||||| |||| ||||||| ||
Sbjct: 522 gcctctcacacgtgaagtcgcgggttcgaaacctgacaagtaccaatgtgatcttcatcg 463
Query: 514 agtcatatgtactttctaagagtattt 540
|||||||||||||||||||||||||||
Sbjct: 462 agtcatatgtactttctaagagtattt 436
>BF01029B2F12
Length = 749
Score = 79.8 bits (40), Expect = 2e-14
Identities = 71/80 (88%), Gaps = 1/80 (1%)
Strand = Plus / Minus
Query: 469 gggcgcgggttcgaaatctggcaagtatcaatatgatcttttccgagtcatatgtacttt 528
|||||||||||||||| |||||||||| |||| |||| || | ||| ||||||||||||
Sbjct: 668 gggcgcgggttcgaaacctggcaagtaccaatgtgat-ttatgagagacatatgtacttt 610
Query: 529 ctaagagtatttggacacca 548
|||||||||||| |||||||
Sbjct: 609 ctaagagtatttagacacca 590
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,762
Number of extensions: 5043
Number of successful extensions: 5043
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 5040
Number of HSP's successfully gapped: 5
Length of query: 2023
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2006
Effective length of database: 8,119,229
Effective search space: 16287173374
Effective search space used: 16287173374
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)