BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05945 (UTR included)
(1408 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 94 7e-19
BF01060B1D11 90 1e-17
>BF01047B2H03
Length = 758
Score = 93.7 bits (47), Expect = 7e-19
Identities = 74/83 (89%)
Strand = Plus / Minus
Query: 632 aacttcctacatctgcgtggaggcagttggaaatgctgagcatttgctggtgggatgtag 691
||||| ||| ||||||| |||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Query: 692 ggcactcatgcatagcggtcaat 714
| |||| || ||||||||||||
Sbjct: 305 gctactcctggatagcggtcaat 283
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 788 aacttcctacatctgcgtggaggcagttggaaatgctgagcatttgctggtgggatgtag 847
||||| ||| ||||||| |||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 365 aacttgctatatctgcgaggaggcagttggaattgctgagcatttgctgatgggatgtag 306
Score = 77.8 bits (39), Expect = 4e-14
Identities = 135/167 (80%)
Strand = Plus / Minus
Query: 938 ttttggtagccagagcgcaaaaggaaataaccacaatctagcgatcaataggttttgtga 997
||||||||| || ||| |||| ||||||||||||| | ||||| ||| ||||||||||
Sbjct: 230 ttttggtagtcattgcggaaaaagaaataaccacaaacgggcgattaattggttttgtga 171
Query: 998 gagaaggcactagggctacaagatcagacgtcaagcctgactttaacattacagtggctt 1057
|||||| || |||||||| || ||| || |||||||| ||| || | ||| || || ||
Sbjct: 170 gagaagacattagggctataaagtcaaacatcaagccttactctatccttaaagcggttt 111
Query: 1058 cggattggaacataatgatggatacgtatgagaaacaatataaaatc 1104
||||||| | ||||| ||||||||||||| | ||| ||| ||||||
Sbjct: 110 cggattgcactataatcatggatacgtatggggaacgatacaaaatc 64
>BF01060B1D11
Length = 799
Score = 89.7 bits (45), Expect = 1e-17
Identities = 94/110 (85%), Gaps = 4/110 (3%)
Strand = Plus / Minus
Query: 742 tcccagatcagagtaatttagtaggatgcg----gtaaaggtaccgaaaaaacttcctac 797
||||||||||||||||||||||| || | | |||||| |||||||||||||| |||
Sbjct: 234 tcccagatcagagtaatttagtaagacgggaggggtaaagataccgaaaaaacttgctat 175
Query: 798 atctgcgtggaggcagttggaaatgctgagcatttgctggtgggatgtag 847
|| |||| | |||||||||||| |||| ||||||||||| ||||||||||
Sbjct: 174 atttgcgagaaggcagttggaattgctaagcatttgctgatgggatgtag 125
Score = 83.8 bits (42), Expect = 7e-16
Identities = 69/78 (88%)
Strand = Plus / Minus
Query: 615 ggtaaaggtaccgaaaaaacttcctacatctgcgtggaggcagttggaaatgctgagcat 674
||||||| |||||||||||||| ||| || |||| | |||||||||||| |||| |||||
Sbjct: 201 ggtaaagataccgaaaaaacttgctatatttgcgagaaggcagttggaattgctaagcat 142
Query: 675 ttgctggtgggatgtagg 692
|||||| |||||||||||
Sbjct: 141 ttgctgatgggatgtagg 124
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 149,173
Number of extensions: 2772
Number of successful extensions: 2772
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 2772
Number of HSP's successfully gapped: 5
Length of query: 1408
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1391
Effective length of database: 8,119,229
Effective search space: 11293847539
Effective search space used: 11293847539
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)