BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05949 (UTR included)
(2053 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1695_C1 96 3e-19
BF14_729_C3 94 1e-18
BF01061B1E05 92 4e-18
BF01049B2H03 84 1e-15
BF01025B2E05 72 4e-12
BF14_3184_C1 70 2e-11
>BF14_1695_C1
Length = 1407
Score = 95.6 bits (48), Expect = 3e-19
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 1967 taatgagatctaagattttcgcgagtattcatttaaatgaaactagta 2014
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 taatgagatctaagattttcgcgagtattcatttaaatgaaactagta 1067
>BF14_729_C3
Length = 2041
Score = 93.7 bits (47), Expect = 1e-18
Identities = 50/51 (98%)
Strand = Plus / Minus
Query: 1969 atgagatctaagattttcgcgagtattcatttaaatgaaactagtattatt 2019
||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1729 atgagatctaagattttcgcgagtattcatttaaatgaagctagtattatt 1679
>BF01061B1E05
Length = 745
Score = 91.7 bits (46), Expect = 4e-18
Identities = 46/46 (100%)
Strand = Plus / Minus
Query: 1970 tgagatctaagattttcgcgagtattcatttaaatgaaactagtat 2015
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tgagatctaagattttcgcgagtattcatttaaatgaaactagtat 9
>BF01049B2H03
Length = 832
Score = 83.8 bits (42), Expect = 1e-15
Identities = 48/50 (96%)
Strand = Plus / Minus
Query: 1967 taatgagatctaagattttcgcgagtattcatttaaatgaaactagtatt 2016
||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 354 taatgagatctaagattttagcgagtattcatttaaatgaaactaatatt 305
>BF01025B2E05
Length = 759
Score = 71.9 bits (36), Expect = 4e-12
Identities = 50/54 (92%), Gaps = 3/54 (5%)
Strand = Plus / Minus
Query: 1965 attaatgagatctaagattttcgcgagt---attcatttaaatgaaactagtat 2015
||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 123 attaatgagatctaagactttcgcgagttttattcatttaaatgaaactagtat 70
>BF14_3184_C1
Length = 1256
Score = 69.9 bits (35), Expect = 2e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 1973 gatctaagattttcgcgagtattcatttaaatgaaacta 2011
||||||||||||||||||||| |||||||||||||||||
Sbjct: 14 gatctaagattttcgcgagtactcatttaaatgaaacta 52
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 302,646
Number of extensions: 7559
Number of successful extensions: 7559
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 7558
Number of HSP's successfully gapped: 6
Length of query: 2053
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2036
Effective length of database: 8,119,229
Effective search space: 16530750244
Effective search space used: 16530750244
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)