BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05959 (UTR included)
(2098 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1113_C1 1631 0.0
BF01027B1H01 890 0.0
BF14_736_C1 115 3e-25
BF01052B2H04 78 6e-14
BF01048A1E10 74 1e-12
BF01059A2H01 68 6e-11
>BF14_1113_C1
Length = 1085
Score = 1631 bits (823), Expect = 0.0
Identities = 863/875 (98%), Gaps = 1/875 (0%)
Strand = Plus / Plus
Query: 1197 gtccgcgggccgagatctcctgacaccgcgtcactacgacattctatgtccgctcacagt 1256
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 62 gtccgcgggccgagatctcctgacaccgcgtcactacgacattcgatgtccgctcacagt 121
Query: 1257 gttaaggactatacttactcgtccaacggggagtggagacagcacgggggagggacgacg 1316
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 122 gttaaggactatacttactcgtccaacggggaatggagacagcacgggggagggacgacg 181
Query: 1317 gtcacctcgcctcacgaccaggacagagacaggagcgagtcgtattctgtgagggagtgg 1376
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gttacctcgcctcacgaccaggacagagacaggagcgagtcgtattctgtgagggagtgg 241
Query: 1377 gagcgggacagggaggcgtcccgggacggacgggacagggacagggagtacccgtccgcg 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gagcgggacagggaggcgtcccgggacggacgggacagggacagggagtacccgtccgcg 301
Query: 1437 gtgatggcggaacacaggggcttcaccaggagaccggtcgccaggaactccaacctcctg 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtgatggcggaacacaggggcttcaccaggagaccggtcgccaggaactccaacctcctg 361
Query: 1497 tcagcggtgctgtgcctcgtcaaggagctggactaccccagcctggaggtggccgagatg 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tcagcggtgctgtgcctcgtcaaggagctggactaccccagcctggaggtggccgagatg 421
Query: 1557 gctgtcagatgtcgcatggacgagctcgcgaatagccagtgacgtcacgaggacgaggga 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gctgtcagatgtcgcatggacgagctcgcgaatagccagtgacgtcacgaggacgaggga 481
Query: 1617 acgcccttgcagtgaacggacagaccaaagttatgtgaaccggactgacaagagaaatgt 1676
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 acgcccttgcagtgaacggacagaccaaagttatgtgaaccggactgacaagagaaatgt 541
Query: 1677 acgggggtagggacctcagtagaatggtcgtacagccctctatactgtgacgtacaaata 1736
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 acgggggaagggacctcagtagaatggtcgtacagccctctatactgtgacgtacaaata 601
Query: 1737 actattgaatactatatatgcgaatatgatctttaacactaggacataacgatcgaaacg 1796
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 602 actattgaatactatatatgcgaatatgatctttaacactagaacataacgatcgaaacg 661
Query: 1797 gcctacggatgatgtaactacgaacaaatcggtatacgggtactgttcacttcgtgtagc 1856
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gcctacggatgatgtaactacgaacaaatcggtatacgggtactgttcacttcgtgtagc 721
Query: 1857 gcttggatgaattcggctttaactatactgtaataaggttcatattgtcagcgacggcgg 1916
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gcttggatgaattcggctttaactatactgtaataaggttcatattgtcagcgacggcga 781
Query: 1917 ccggcggccgggcctgggcggatgtttggcgccggacacgacgccttatatcattagtgt 1976
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||
Sbjct: 782 ccggcggccgggcctgggcgaatgtttggcgccggacacgacaccttatatcattagtgt 841
Query: 1977 gctgaactagattaaagcatgtctcttaagaacgcttccgctgttggcgcgcgg-tcctg 2035
|||||||||||||||||||||||||||||||||||||||||||| | ||||||| |||||
Sbjct: 842 gctgaactagattaaagcatgtctcttaagaacgcttccgctgtagccgcgcggctcctg 901
Query: 2036 agcgccagcttggccgcagttggccgctgttggcc 2070
||||||||||||||||||||||||||| |||||||
Sbjct: 902 agcgccagcttggccgcagttggccgcagttggcc 936
Score = 97.6 bits (49), Expect = 7e-20
Identities = 49/49 (100%)
Strand = Plus / Plus
Query: 1016 caggcaccagcacccgcaggcacacgcgcagggacagagacacgaacac 1064
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13 caggcaccagcacccgcaggcacacgcgcagggacagagacacgaacac 61
>BF01027B1H01
Length = 705
Score = 890 bits (449), Expect = 0.0
Identities = 458/461 (99%)
Strand = Plus / Plus
Query: 610 gtatcaacaagatccgttctctgggtgacttcgctggttgccgtcgcctccgggagctgt 669
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gtatcaacaagatccgttctctgggtgacttcgctggttgccgtcgcctccgggagctgt 304
Query: 670 acgtgaggaagaatgagatacgggacctggctgagatcaggcacctgcgacacctcccgg 729
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 acgtgaggaagaatgagatacgggacctggctgagatcaggcacctgcgacacctcccgg 364
Query: 730 acctcaccagcctctggctggatgagaacccctgtacattacaccctgaataccgcatga 789
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 acctcaccagcctttggctggatgagaacccctgtacattacaccctgaataccgcatga 424
Query: 790 cggtgctcaggaacctaccgaaccttgagaaactggataacgtggttgtacagcctgatg 849
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cggtgctgaggaacctaccgaaccttgagaaactggataacgtggttgtacagcctgatg 484
Query: 850 aggtccaggaggcgatgaggcgcggagtccacatcccggactcggacgacgaaggctacc 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aggtccaggaggcgatgaggcgcggagtccacatcccggactcggacgacgaaggctacc 544
Query: 910 ctcagactcaggagtcgtacggccaatacaggagacagaggtcctgcgagtccagtcccg 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ctcagactcaggagtcgtacggccaatacaggagacagaggtcctgcgagtccagtcccg 604
Query: 970 agagggagccggagtactaccggcagcagcagagccaaccgccacccaggcaccagcacc 1029
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 agagggagacggagtactaccggcagcagcagagccaaccgccacccaggcaccagcacc 664
Query: 1030 cgcaggcacacgcgcagggacagagacacgaacactgggcg 1070
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 cgcaggcacacgcgcagggacagagacacgaacactgggcg 705
>BF14_736_C1
Length = 796
Score = 115 bits (58), Expect = 3e-25
Identities = 76/82 (92%)
Strand = Plus / Plus
Query: 415 tagagcctagctgtggtgaaattactacagctcgaacatgggctagctcgaccggggaag 474
||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 588 tagagcctagctgtggtcaagttactacagctcgaacatgggctggctcgaccggggaag 647
Query: 475 taccactttcccacagaagatc 496
|||||| || |||||||||||
Sbjct: 648 taccaccctctcacagaagatc 669
>BF01052B2H04
Length = 668
Score = 77.8 bits (39), Expect = 6e-14
Identities = 69/79 (87%)
Strand = Plus / Minus
Query: 415 tagagcctagctgtggtgaaattactacagctcgaacatgggctagctcgaccggggaag 474
|||||||| |||||||| | | ||||||||||||||||||||| ||||| |||||||||
Sbjct: 469 tagagcctggctgtggtcatgtaactacagctcgaacatgggctggctcgtccggggaag 410
Query: 475 taccactttcccacagaag 493
|||||| || ||||||||
Sbjct: 409 taccaccctctcacagaag 391
>BF01048A1E10
Length = 804
Score = 73.8 bits (37), Expect = 1e-12
Identities = 79/93 (84%)
Strand = Plus / Minus
Query: 515 tgccctttccctgttcccatcctttcctctccctcttccccaaataaggctagcaacgca 574
|||||||| | | |||||| |||||||| |||||||| |||||| |||| | ||||| ||
Sbjct: 571 tgcccttttcgttttcccaccctttcctatccctctttcccaaacaagggtggcaacaca 512
Query: 575 tccacaaaactatttagcggatgtccatgggcg 607
| | ||||||||| | |||||||||||||||||
Sbjct: 511 ttcgcaaaactatgttgcggatgtccatgggcg 479
>BF01059A2H01
Length = 865
Score = 67.9 bits (34), Expect = 6e-11
Identities = 70/82 (85%)
Strand = Plus / Minus
Query: 415 tagagcctagctgtggtgaaattactacagctcgaacatgggctagctcgaccggggaag 474
||||||||||||||||| | | |||||||||| |||||| ||| ||| ||||| |||||
Sbjct: 346 tagagcctagctgtggtcacgtaactacagctccaacatgagctggcttgaccgtggaag 287
Query: 475 taccactttcccacagaagatc 496
|||||| || |||||||||||
Sbjct: 286 taccaccctctcacagaagatc 265
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 173,978
Number of extensions: 3460
Number of successful extensions: 3460
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 3457
Number of HSP's successfully gapped: 8
Length of query: 2098
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2081
Effective length of database: 8,119,229
Effective search space: 16896115549
Effective search space used: 16896115549
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)