BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05965 (UTR included)
(4174 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01011B2D07 1261 0.0
>BF01011B2D07
Length = 654
Score = 1261 bits (636), Expect = 0.0
Identities = 649/654 (99%)
Strand = Plus / Plus
Query: 2938 tattaggagttgttgcattactactcgcagatagttatatcttctcggtattctttaaaa 2997
|||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 1 tattaggagttgttgcattactactcgcagntntttatatcttctcggtattctttaaaa 60
Query: 2998 tggtattcatggtcattttcttcggtgccatgcatggtttattcctcctaccagttcttt 3057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtattcatggtcattttcttcggtgccatgcatggtttattcctcctaccagttcttt 120
Query: 3058 tgtccctctttggtccagggtcgtgtacaagggaaacgaaagagataaaaatagcaaaag 3117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtccctctttggtccagggtcgtgtacaagggaaacgaaagagataaaaatagcaaaag 180
Query: 3118 tagacaagattttccctaatccgtattgcttaccgcatcctcaattggttctgaatgatc 3177
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagataagattttccctaatccgtattgcttaccgcatcctcaattggttctgaatgatc 240
Query: 3178 aaatttataatgggaagaatataaatccaaacggtatttacaaaatatatggagacgaca 3237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatttataatgggaagaatataaatccaaacggtatttacaaaatatatggagacgaca 300
Query: 3238 aggatcttggaattggcacgtccggtgaagatactagtgagagcagttcgaatcaatcac 3297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aggatcttggaattggcacgtccggtgaagatactagtgagagcagttcgaatcaatcac 360
Query: 3298 aaagacgtcaaattagcagcgacgaaaacagcagaaagaattacgaagacggatggaaga 3357
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 361 aaagacgtcaaattagcagcgacgaaaatagcagaaagaattacgaagacggatggaaga 420
Query: 3358 aattcggctatcatcagagcacaagtcaatttcaaccgtcaggggagctggatttgtatg 3417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aattcggctatcatcagagcacaagtcaatttcaaccgtcaggggagctggatttgtatg 480
Query: 3418 agcacgatcatgataaggcttggcaaagacaacgcaactatcgcagtcaagatagttaca 3477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agcacgatcatgataaggcttggcaaagacaacgcaactatcgcagtcaagatagttaca 540
Query: 3478 aaagaccaagccatagagatggagattttataagaaccagaaaaactagcgatgccgttc 3537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aaagaccaagccatagagatggagattttataagaaccagaaaaactagcgatgccgttc 600
Query: 3538 cagccaatgaagggacatacaaggtgatgagaacccactcccatcacaaccttc 3591
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 cagccaatgaagggacatacaaggtgatgagaacccactcccatcacaaccttc 654
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 509,318
Number of extensions: 25178
Number of successful extensions: 25178
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 25178
Number of HSP's successfully gapped: 1
Length of query: 4174
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4156
Effective length of database: 8,109,745
Effective search space: 33704100220
Effective search space used: 33704100220
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)