BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05974 (UTR included)
(3133 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01042A2F12 714 0.0
>BF01042A2F12
Length = 768
Score = 714 bits (360), Expect = 0.0
Identities = 363/364 (99%)
Strand = Plus / Plus
Query: 544 acattcccgatatacctgaggatattaagaaacttcgggcacttcagatcgctgatttca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 acattcccgatatacctgaggatattaagaaacttcgggcacttcagatcgctgatttca 464
Query: 604 gcagcaatccaatacctcgtctgccggctggcttcagccagctacgagcgctcaccgtcc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gcagcaatccaatacctcgtctgccggctggcttcagccagctacgagcgctcaccgtcc 524
Query: 664 tcggtctcaatgatatgtcactgactagtttacccagcgatttcggcagcttaatatctc 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tcggtctcaatgatatgtcactgactagtttacccagcgatttcggcagcttaatatctc 584
Query: 724 tccaatctttggagctgagagaaaatttgctcaagtcattaccggagtcgctgaagaacc 783
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 585 tccaatctttggagctgagagaaaatttgctcaagtcattgccggagtcgctgaagaacc 644
Query: 784 ttacgaaattggaaaggttggatttgggagataacgagatcgaggaattgcctggtttta 843
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 ttacgaaattggaaaggttggatttgggagataacgagatcgaggaattgcctggtttta 704
Query: 844 tcggtgagctaccagctttacaagaactatggttggatcacaacaaactacaaaatctgc 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 tcggtgagctaccagctttacaagaactatggttggatcacaacaaactacaaaatctgc 764
Query: 904 catc 907
||||
Sbjct: 765 catc 768
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 296,250
Number of extensions: 4816
Number of successful extensions: 4816
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4816
Number of HSP's successfully gapped: 1
Length of query: 3133
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3115
Effective length of database: 8,109,745
Effective search space: 25261855675
Effective search space used: 25261855675
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)