BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN05981 (UTR included)
(2698 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_729_C3 165 5e-40
BF01044B2E12 131 6e-30
BF01012A1B09 117 1e-25
BF01019B1G10 100 2e-20
BF14_729_C2 92 5e-18
BF01024A1H07 90 2e-17
BF14_23_C1 78 8e-14
BF01012A2C11 74 1e-12
BF01035X1C09 68 8e-11
BF01045B1C07 68 8e-11
>BF14_729_C3
Length = 2041
Score = 165 bits (83), Expect = 5e-40
Identities = 89/91 (97%)
Strand = Plus / Plus
Query: 1 acggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaataataaaatccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606 acggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaataataaaatccg 1665
Query: 61 cgtagtaaatccgaataatactagtttcatt 91
||||||| |||||||||||||||| ||||||
Sbjct: 1666 cgtagtatatccgaataatactagcttcatt 1696
>BF01044B2E12
Length = 823
Score = 131 bits (66), Expect = 6e-30
Identities = 75/79 (94%)
Strand = Plus / Plus
Query: 13 aagtaaccgaaacgtcgggattatgtagtttttaaataataaaatccgcgtagtaaatcc 72
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1 aagtaaccgaaacgtcgggattatgtagnnnttaaataataaaatccgcgtagtaaatcc 60
Query: 73 gaataatactagtttcatt 91
||| |||||||||||||||
Sbjct: 61 gaaaaatactagtttcatt 79
>BF01012A1B09
Length = 841
Score = 117 bits (59), Expect = 1e-25
Identities = 83/91 (91%)
Strand = Plus / Minus
Query: 1 acggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaataataaaatccg 60
|||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 831 acggctgctgaaaagtaaccgaaacgtcgggattatgtagttttaaaataataaaatccg 772
Query: 61 cgtagtaaatccgaataatactagtttcatt 91
|||||| ||||||| ||| ||||||||||
Sbjct: 771 cgtagtgtatccgaaatatattagtttcatt 741
>BF01019B1G10
Length = 488
Score = 99.6 bits (50), Expect = 2e-20
Identities = 87/98 (88%), Gaps = 1/98 (1%)
Strand = Plus / Minus
Query: 1 acggttgctgcaaagtaaccgaaacgtcgggattatgtagttttt-aaataataaaatcc 59
|||||| ||| |||| ||||||||||||||||||||||||||||| |||||||||||| |
Sbjct: 385 acggttactgaaaaggaaccgaaacgtcgggattatgtagtttttaaaataataaaattc 326
Query: 60 gcgtagtaaatccgaataatactagtttcattatattg 97
||||||||||| |||| |||| || ||| ||| |||||
Sbjct: 325 gcgtagtaaatgcgaaaaatattacttttattttattg 288
>BF14_729_C2
Length = 1289
Score = 91.7 bits (46), Expect = 5e-18
Identities = 82/93 (88%), Gaps = 2/93 (2%)
Strand = Plus / Plus
Query: 1 acggttgctgcaaagtaaccgaaacgtcgggattatgtagttttta--aataataaaatc 58
|||||||||| ||||||||||||||||||||| ||||||||||||| || ||||||
Sbjct: 546 acggttgctgaaaagtaaccgaaacgtcgggagtatgtagtttttaacaaaaataaagca 605
Query: 59 cgcgtagtaaatccgaataatactagtttcatt 91
|||||||| ||||||||||| |||||||||||
Sbjct: 606 cgcgtagtttatccgaataattctagtttcatt 638
>BF01024A1H07
Length = 726
Score = 89.7 bits (45), Expect = 2e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 acggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaataataaaatccg 60
|||||||||| ||||||||||||||||| | ||||||||| ||| |||||||||||||||
Sbjct: 665 acggttgctgaaaagtaaccgaaacgtcngnattatgtagntttaaaataataaaatccg 724
Query: 61 cg 62
||
Sbjct: 725 cg 726
>BF14_23_C1
Length = 1573
Score = 77.8 bits (39), Expect = 8e-14
Identities = 66/75 (88%)
Strand = Plus / Plus
Query: 17 aaccgaaacgtcgggattatgtagtttttaaataataaaatccgcgtagtaaatccgaat 76
|||| |||||||| |||||||||||||||||| ||||||| ||||||||| ||||| |
Sbjct: 371 aaccaaaacgtcgcgattatgtagtttttaaacaataaaaaccgcgtagtgtttccgact 430
Query: 77 aatactagtttcatt 91
|| ||||||||||||
Sbjct: 431 aaaactagtttcatt 445
>BF01012A2C11
Length = 780
Score = 73.8 bits (37), Expect = 1e-12
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 1 acggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaat 49
|||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 286 acggttgctgcaaagtaaccgaaacgtcgggagcatttagtttttaaat 238
>BF01035X1C09
Length = 778
Score = 67.9 bits (34), Expect = 8e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 1 acggttgctgcaaagtaaccgaaacgtcgggattatgtagtt 42
||||||||||||||||||||||||||| ||||| ||||||||
Sbjct: 646 acggttgctgcaaagtaaccgaaacgttgggataatgtagtt 605
>BF01045B1C07
Length = 805
Score = 67.9 bits (34), Expect = 8e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1 acggttgctgcaaagtaaccgaaacgtcgggattatgtagtttttaaataataaaatccg 60
|||| |||||||| ||| ||||||||||||| |||||||||| |||||||||||| ||
Sbjct: 701 acggatgctgcaatataatcgaaacgtcgggagtatgtagtttaaaaataataaaatacg 760
Query: 61 cgtagt 66
||||||
Sbjct: 761 cgtagt 766
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,510
Number of extensions: 5857
Number of successful extensions: 5857
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 5855
Number of HSP's successfully gapped: 10
Length of query: 2698
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2681
Effective length of database: 8,119,229
Effective search space: 21767652949
Effective search space used: 21767652949
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)