BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06005 (UTR included)
(1711 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1515_C1 1033 0.0
>BF14_1515_C1
Length = 919
Score = 1033 bits (521), Expect = 0.0
Identities = 542/549 (98%)
Strand = Plus / Plus
Query: 762 aaccccatgactgatccaggtatgatgacagatatgttaaaaggcaatgtcactaatgta 821
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 371 aaccccatgactgatccaggtatgatgacggatatgttaaaaggcaatgtcactaatgta 430
Query: 822 ttgccaatgatagtgattggaggctggattaattggatgtttagcggtttcttaacaacc 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttgccaatgatagtgattggaggctggattaattggatgtttagcggtttcttaacaacc 490
Query: 882 aaagtaccatttcccttgactcttcgattcaagcccatgttgcaacgtggtgttgagttg 941
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 aaagtaccatttcccctgactcttcgattcaagcccatgttgcaacgtggtgttgagttg 550
Query: 942 gcatatctggatgcatcctgggtttcctctgcatcctggtacttccttaacgtgtttggt 1001
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 551 gcatatctggatgcatcctgggtttcctcggcgtcctggtacttccttaacgtgtttggt 610
Query: 1002 ttacggactatatatgcacttgtgctaggagaaaacaatgccgcggaccagtctaaggtg 1061
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 611 ttacggactatatatgcacttgtactaggagaaaacaatgccgcggaccagtctaaggtg 670
Query: 1062 atgcaggatcagatgtcgggagctgctatggctatgcctcaggaccctaaagctgccttc 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 atgcaggatcagatgtcgggagctgctatggctatgcctcaggaccctaaagctgccttc 730
Query: 1122 aaggctgagtgggaagccttagagatcacagaacatcgttgggtgttggctagtgttgaa 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aaggctgagtgggaagccttagagatcacagaacatcgttgggtgttggctagtgttgaa 790
Query: 1182 aatgatctactgaatcctgaaggagagtaaatgcatttatagccttaccaatttgtaggt 1241
||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 791 aatgatctactgaatcccgaaggagagtaaatgcatttatagctttaccaatttgtaggt 850
Query: 1242 agtttgacttattgttagataatttataatatatttaatagatgtgtttcagacatattt 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 agtttgacttattgttagataatttataatatatttaatagatgtgtttcagacatattt 910
Query: 1302 agatactgc 1310
|||||||||
Sbjct: 911 agatactgc 919
Score = 670 bits (338), Expect = 0.0
Identities = 341/342 (99%)
Strand = Plus / Plus
Query: 420 actacggtgttcagttgaattaataaataatagaaattataattattaaaacatagagga 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 actacggtgttcagttgaattaataaataatagaaattataattattaaaacatagagga 61
Query: 480 aattattaattgaaacacaaaatggcagaattacttttagatccaaatattcgtgtgtgg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aattattaattgaaacacaaaatggcagaattacttttagatccaaatattcgtgtgtgg 121
Query: 540 gtttttttacccatagtcatcatcactttcttggttggaattgtgaggcattatgtgtcc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtttttttacccatagtcatcatcactttcttggttggaattgtgaggcattatgtgtcc 181
Query: 600 ataatcctttcatctcaaaaaaagattgaatcattccaagtacaggacagtcaggtcatg 659
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 182 ataatcctttcatctcaaaaaaagattgagtcattccaagtacaggacagtcaggtcatg 241
Query: 660 ataagagctaggcttcttcgagagaatggtaaatatctgcccagacaatcctttaacatg 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ataagagctaggcttcttcgagagaatggtaaatatctgcccagacaatcctttaacatg 301
Query: 720 cgcagacactggttcaataacgaggatacaggatatttcaaa 761
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgcagacactggttcaataacgaggatacaggatatttcaaa 343
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 289,495
Number of extensions: 8112
Number of successful extensions: 8112
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 8112
Number of HSP's successfully gapped: 2
Length of query: 1711
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1694
Effective length of database: 8,119,229
Effective search space: 13753973926
Effective search space used: 13753973926
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)