BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06006 (UTR included)
(4933 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01034B1H12 1354 0.0
BF01013B1E03 718 0.0
>BF01034B1H12
Length = 721
Score = 1354 bits (683), Expect = 0.0
Identities = 710/721 (98%)
Strand = Plus / Plus
Query: 298 tatgtttactttttaactgacttcaatttcatttcaattattatttgactgacacaaata 357
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tatgtttattttttaactgacttcaatttcatttcaattattatttgactgacacaaata 60
Query: 358 tatcttagtagaaatcatgaaattatgattgccagtatatacagtcacaagttactaacg 417
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tatcttagtataaatcatgaaattatgattgccagtatatacagtcacaagttactaacg 120
Query: 418 gatatacaatgttgagacaatgtatgggaaattttagctggaagagaaagtgtcttaaat 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatatacaatgttgagacaatgtatgggaaattttagctggaagagaaagtgtcttaaat 180
Query: 478 aatattaacgggtcgatatgaatatgtctgtctcggatttatctgttggatgccgatttg 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aatattaacgggtcgatatgaatatgtctgtctcggatttatctgttggatgccgatttg 240
Query: 538 cggattattttgtaatttgtggcctcgatttcgactcaggattagaagctgatggtttaa 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cggattattttgtaatttgtggcctcgatttcgactcaggattagaagctgatggtttaa 300
Query: 598 gtggagacaatttacacatatcgcccctcgatcgttcatacaaaggaaaagttctagctc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggagacaatttacacatatcgcccctcgatcgttcatacaaaggaaaagttctagctc 360
Query: 658 actaccctgagaatgttcactctaataaatttgacgaaaatgcagtgtgtatgctctgcc 717
||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 361 actaccctgagaatgttcattctaataaatttgatgaaaatgcagtgtgtatgctctgcc 420
Query: 718 tgccagctagtctccagttcaaaacacaaaaacattcattagaaccaaagtttcatagtt 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgccagctagtctccagttcaaaacacaaaaacattcattagaaccaaagtttcatagtt 480
Query: 778 ttgtagtgaccagggaaaatgcatctagatactatggattcagtcttatcttctatgaag 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttgtagtgaccagggaaaatgcatctagatactatggattcagtcttatcttctatgaag 540
Query: 838 aagtgcgaaacaggaacatatgcaatgccatgcatacacttcaggctatgtatatcactg 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aagtgcgaaacaggaacatatgcaatgccatgcatacacttcaggctatgtatatcactg 600
Query: 898 aattatctagtgggcagactccgccaggtcatagaaaaggttcaggcaaagagagttcta 957
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 601 aattatcgagtgggcagactccgccaggtcatagnnnnnnttcaggcaaagagagttcta 660
Query: 958 gatctttgccgcgttcattcaaacttgccccacacacaggagctgcactcacatactatg 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gatctttgccgcgttcattcaaacttgccccacacacaggagctgcactcacatactatg 720
Query: 1018 a 1018
|
Sbjct: 721 a 721
>BF01013B1E03
Length = 853
Score = 718 bits (362), Expect = 0.0
Identities = 398/406 (98%), Gaps = 3/406 (0%)
Strand = Plus / Plus
Query: 4529 acgttaggaagatggacttttagtcacatttaatactcgtaaattatgaatttattgtta 4588
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 49 acgttaggaagatggacttttagtcacattaaatactcgtaaattatgaatttattgtta 108
Query: 4589 tattcggggttacacttttacttttttttt-attaagttttttttttgtgatcgttatat 4647
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||
Sbjct: 109 tattcggggttacacttttacttttttttttattaagttttttttt-gtgatcgttatat 167
Query: 4648 tcttttttacttgccagtttgatccaaagattttgaagcacgctagatttaagaactgtt 4707
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 t-ttttttacttgccagtttgatccaaagattttgaagcacgctagatttaagaactgtt 226
Query: 4708 tcactttaggaattttatttgtgtgttagacgcgagaaggatttatccttagttgccatt 4767
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tcactttaggaatttaatttgtgtgttagacgcgagaaggatttatccttagttgccatt 286
Query: 4768 tagatgcaatgttcatgacacaaattatatttagctatagcaacaccttagagattcgtc 4827
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tagacgcaatgttcatgacacaaattatatttagctatagcaacaccttagagattcgtc 346
Query: 4828 tttaaaaatgtatgctttaatattatgtacaaaagaaccactgctggtcggaggtaatca 4887
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 347 tttaaaaatgtatgctttaatattatgtacaaaagaaccactgctggtcggaggtaatta 406
Query: 4888 taacttggactctcctagaaattattctagaactttccttttcatt 4933
|| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 tagcttggactctcctagaaattattctagaactttccttttcatt 452
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 472,232
Number of extensions: 8444
Number of successful extensions: 8444
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 8441
Number of HSP's successfully gapped: 3
Length of query: 4933
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4915
Effective length of database: 8,109,745
Effective search space: 39859396675
Effective search space used: 39859396675
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)