BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06033 (UTR included)
(1503 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01048B2G04 884 0.0
>BF01048B2G04
Length = 847
Score = 884 bits (446), Expect = 0.0
Identities = 470/478 (98%)
Strand = Plus / Plus
Query: 16 gcttcgcggcggcggcgtgcgtccgggccagctcgtggatgtggagcgtcggttggtgga 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gcttcgcggcggcggcgtgcgtccgggccagctcgtggatgtggagcgtcggttggtgga 429
Query: 76 agaagccgacatcgtggccacaaccctcgccagctcagtcaaccacaagatgcgggggtt 135
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agaagcagacatcgttgccacaaccctcgccagctcagtcaaccacaagatgcgggggtt 489
Query: 136 gagaggtatcgaactttgcatagtggaggaagccggtcaggccatcgaacccgagacctt 195
|||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 490 gagaggtatcgaactttgcatagtggaggaagccgggcaggccattgagcccgagacctt 549
Query: 196 gctgcctctgatgctgggagtcaacaagatgacgctggtgggagacccgcaacaactgcc 255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gctgcctctgatgctgggagtcaacaagatgacgctggtgggagacccgcaacaactgcc 609
Query: 256 ggggtacatctgttcggagcgagccaagacgcacggtctggacaggagtctgttctcccg 315
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 610 ggggtacatctgttcggagcgggccaagacgcacggtctggacaggagtctgttctcccg 669
Query: 316 cttggccgcgtatagtgagtgctgggaacggccaccgttggtgctactggatcgccagta 375
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 670 cttggccgcgtatagtgagtgttgggaacggccaccgttggtgctactggatcgccagta 729
Query: 376 caggatgcaccccaccatcgccgactaccccaacagagccttctatggggggagggtgca 435
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 caggatgcaccctaccatcgccgactaccccaacagagccttctatggggggagggtgca 789
Query: 436 gtccgtgcccccaccaccactctcactacacctaccaccctactgcatactcgacata 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gtccgtgcccccaccaccactctcactacacctaccaccctactgcatactcgacata 847
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 161,918
Number of extensions: 3466
Number of successful extensions: 3466
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3466
Number of HSP's successfully gapped: 1
Length of query: 1503
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1486
Effective length of database: 8,119,229
Effective search space: 12065174294
Effective search space used: 12065174294
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)