BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06048 (UTR included)
(4144 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A1B04 874 0.0
>BF01017A1B04
Length = 728
Score = 874 bits (441), Expect = 0.0
Identities = 450/453 (99%)
Strand = Plus / Plus
Query: 750 tgggtggctcctaatggtcatatatttctcgagtcattttcgccagtctataaacatgct 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggtggctcctaatggtcatatatttctcgagtcattttcgccagtctataaacatgct 60
Query: 810 catgactttttaattgctatcgctgagccagtgtcaaggcctcagcacattcatgagtat 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgactttttaattgctatcgctgagccagtgtcaaggcctcagcacattcatgagtat 120
Query: 870 aaattaacagcgtacagtttatatgcagcagtttctgtgggtttgcaaacaaatgacata 929
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaattaacagcctacagtttatatgcagcagtttctgtgggtttgcaaacaaatgacata 180
Query: 930 attgaatatttacaacgtctcagtaagtgtaacgttccggccggtatcatagaattcatc 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attgaatatttacaacgtctcagtaagtgtaacgttccggccggtatcatagaattcatc 240
Query: 990 acactttgtactttgtcttatggcaaagttaagcttgtactgaaacataacagatatcta 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acactttgtactttgtcttatggcaaagttaagcttgtactgaaacataacagatatcta 300
Query: 1050 gtggagagtaagcacgtggatgttcttcagaagctcctcaaggatcccgtgatccagcag 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtggagagtaagcacgtggatgttcttcagaagctcctcaaggatcccgtgatccagcag 360
Query: 1110 tgtagactgagacgagacggagatgaagaactggttacctccgctctacctactacggcg 1169
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 361 tgtagactgagacgagacggcgatgaagaactggtcacctccgctctacctactacggcg 420
Query: 1170 cccgcaccgcccgggaccgcagttaagactggt 1202
|||||||||||||||||||||||||||||||||
Sbjct: 421 cccgcaccgcccgggaccgcagttaagactggt 453
Score = 242 bits (122), Expect = 4e-63
Identities = 125/126 (99%)
Strand = Plus / Plus
Query: 1205 ggtgatacaaaaacgctgcatcgagctggagtatccgctgctggcggagtacgacttccg 1264
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ggtgatacaaaaacgctgcatcgagctggagtatccgctgctggcggagtacgacttccg 662
Query: 1265 caacgacgccgtcaaccctgacattaacattgatctaaagcctacagcagtgctgcgacc 1324
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 663 caacgacgccgtcaaccctgacattaacattgatctaaaacctacagcagtgctgcgacc 722
Query: 1325 ctacca 1330
||||||
Sbjct: 723 ctacca 728
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 422,951
Number of extensions: 9102
Number of successful extensions: 9102
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9102
Number of HSP's successfully gapped: 2
Length of query: 4144
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4126
Effective length of database: 8,109,745
Effective search space: 33460807870
Effective search space used: 33460807870
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)