BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06062 (UTR included)
(4198 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01017A2F11 1386 0.0
BF01024A2E06 432 e-120
>BF01017A2F11
Length = 723
Score = 1386 bits (699), Expect = 0.0
Identities = 717/723 (99%)
Strand = Plus / Plus
Query: 2991 accaagacgttctcgaggaaggaacacttgactaatcatgttaggatccacacaggagaa 3050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 accaagacgttctcgaggaaggaacacttgactaatcatgttaggatccacacaggagaa 60
Query: 3051 tctccacatcgatgtgaattctgtcagaagacatttacccgtaaggagcatttgacgaat 3110
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tctccacatcgatgtgaattctgtcagaagacatttacccgtaaggagcatttgacgaac 120
Query: 3111 catctaaagcaacacaccggcgacacgccgcacgcctgcaaagtgtgctccaaaccattc 3170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 catctaaagcaacacaccggcgacacgccgcacgcctgcaaagtgtgctccaaaccattc 180
Query: 3171 actagaaaagaacatctcattactcacatgaggtcccacagctgtggcgagcgaccatat 3230
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 181 actagaaaagaacatctcattactcacatgaggtctcacagctgtggcgagcgaccatat 240
Query: 3231 agttgtggcgaatgcgggaaatccttccctctgaagggcaacctattattccatgagcga 3290
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 241 agttgtggcgaatgcggcaaatccttccctctgaagggtaacctattattccatgagcga 300
Query: 3291 tctcacaacaaaaacaacgcagctaacaagccgttccgatgtgatgtgtgctccaaagag 3350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tctcacaacaaaaacaacgcagctaacaagccgttccgatgtgatgtgtgctccaaagag 360
Query: 3351 tttatgtgcaaaggtcatctagtaacacataagagaactcacacggacactgaaacaccg 3410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tttatgtgcaaaggtcatctagtaacacataagagaactcacacggacactgaaacaccg 420
Query: 3411 gccgctgaaacggctccagaagatgattgcggagatttcactaaatgcgaaaaagacgct 3470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccgctgaaacggctccagaagatgattgcggagatttcactaaatgcgaaaaagacgct 480
Query: 3471 gatagacctgaacgaaagcacgatattaggacaacaacagaaaatagaccagcggaaacg 3530
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 481 gatagacctgaacgaaagcacgatattaggacgacaacagaaaacagaccagcggaaacg 540
Query: 3531 aatgtcacaagcaatcagccaacaaatacagcagtgatgcaaataactagccaggaagtt 3590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatgtcacaagcaatcagccaacaaatacagcagtgatgcaaataactagccaggaagtt 600
Query: 3591 agaacgtgccccacaacaagcacgccatctgttgccggtacatacacacatacaaatacc 3650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaacgtgccccacaacaagcacgccatctgttgccggtacatacacacatacaaatacc 660
Query: 3651 catcacagtggaacgataacacaccatccagtgtccgtgaattactagcatactaaattg 3710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 catcacagtggaacgataacacaccatccagtgtccgtgaattactagcatactaaattg 720
Query: 3711 gac 3713
|||
Sbjct: 721 gac 723
>BF01024A2E06
Length = 724
Score = 432 bits (218), Expect = e-120
Identities = 227/230 (98%)
Strand = Plus / Plus
Query: 3969 aaaatatttcattagttttattataaattaaaatacggtataatttttatgttaatcata 4028
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1 aaaatatttcattagttttattataaattaaaatacgatataatttttatgttaatcata 60
Query: 4029 cggcttgcactttataaaattatgtaatatatagtctgatctagtatattttataacaca 4088
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 61 cggcttgcactttataaaattatgtaatatatagtctgatttagtatattttataacaca 120
Query: 4089 gctaatttgtgatttaagatagtggttctggtttaaatcctatattatatttagagctta 4148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctaatttgtgatttaagatagtggttctggtttaaatcctatattatatttagagctta 180
Query: 4149 cttatattaaggtttatacaagtcttcatttctatttacatttaatatgc 4198
||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 181 cttatattaaggtttatacaagtcttcatttctatttacatctaatatgc 230
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 388,309
Number of extensions: 6905
Number of successful extensions: 6905
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6903
Number of HSP's successfully gapped: 2
Length of query: 4198
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4180
Effective length of database: 8,109,745
Effective search space: 33898734100
Effective search space used: 33898734100
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)