BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06067 (UTR included)
(2359 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01060A1G02 1017 0.0
>BF01060A1G02
Length = 833
Score = 1017 bits (513), Expect = 0.0
Identities = 537/546 (98%)
Strand = Plus / Plus
Query: 571 cgctgtcgtcgtccgagtcctcgcccccgcccgacgcccgcgccgctccagcgctgcagc 630
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 288 cgctgtcgtcgtccgagtcctcgccccctcccgacgcccgcgccgctccagcgctgcagc 347
Query: 631 gcttgcgtcgcttcctttcagcgctgcacacgttcgccgcggatgtcagcgctgatgtcg 690
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 348 gcttgcgtcgcttcctttcagcgctgcacacgttcgcagcggatgtcagcgctgatgtcg 407
Query: 691 gcgagagggtccgacagttgatattcaacctcgtggcgggagtcatcagtatcgaggagt 750
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gtgagagggttcgacagttgatattcaacctcgtggcgggagtcatcagtatcgaggagt 467
Query: 751 tccagagcggggtgcaggaagccaccaactatcctctgagagcgtccgtgccggccttcc 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tccagagcggggtgcaggaagccaccaactatcctctgagagcgtccgtgccggccttcc 527
Query: 811 tcagggccttgttacccctggcccttagagacctgcatgctagagctcggagaacgaaac 870
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 528 tcagggccttgttacccctggcccttagagacctgcatgctagagctcgcagaacgaaac 587
Query: 871 agacaccgctgcagtacatcaggtcgcacgagcacaccgtgctggaggcgggcggagacg 930
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 588 agacaccgctgcagtacatcaggtcgcacgagcacaccgtgctggaggcgggcggagatg 647
Query: 931 ccggggacatcttcgcccatgaggcgggcaagagacgtgccagcgaccctttctacgagt 990
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ccggggacatcttcgcccatgaggcgggcaagagacgtgccagcgaccctttctacgagt 707
Query: 991 gtcacagtaacggaactcacgaggactaccctccagccaagaggcctgtgttcaatccgt 1050
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 708 gtcacagtaacggaactcacgaggactaccctccagccaagnnncctgtgttcaatccgt 767
Query: 1051 ccccgttctaccctctgccgtctaacgccagcctcttcgactaccagccttaccactgcc 1110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 ccccgttctaccctctgccgtctaacgccagcctcttcgactaccagccttaccactgcc 827
Query: 1111 ccacgc 1116
||||||
Sbjct: 828 ccacgc 833
Score = 145 bits (73), Expect = 4e-34
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 499 agatggaggcaaaggtgaaggaggaaatacctgacaaagaatacactcagctcaccgtcg 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 agatggaggcaaaggtgaaggaggaaatacctgacaaagaatacactcagctcaccgtcg 179
Query: 559 acaagaggaaacc 571
|||||||||||||
Sbjct: 180 acaagaggaaacc 192
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 270,900
Number of extensions: 21773
Number of successful extensions: 21773
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21773
Number of HSP's successfully gapped: 2
Length of query: 2359
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2342
Effective length of database: 8,119,229
Effective search space: 19015234318
Effective search space used: 19015234318
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)