BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06070 (UTR included)
(2125 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1548_C1 462 e-129
BF01038A2D06 236 1e-61
>BF14_1548_C1
Length = 2616
Score = 462 bits (233), Expect = e-129
Identities = 251/255 (98%), Gaps = 4/255 (1%)
Strand = Plus / Minus
Query: 1871 tgaaacaaagcatctttattgtaatatctgttcgtcataacttcgttaaatataaaataa 1930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2591 tgaaacaaagcatctttattgtaatatctgttcgtcataacttcgttaaatataaaataa 2532
Query: 1931 tacggaaaaggggactcttacaaaaataaacatcttcaataaatatagggacgagacgag 1990
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2531 tacggaaa--gggactcttacaaaaataaacatcttcaataaatatagggacgagacgag 2474
Query: 1991 agagacacagtaaaccatagacatagagctggcggtctctaaggtgctctcgcgactaac 2050
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2473 agagacacagtaaaccatagacatagagctggcggtctctaaggtgctctcgcgactaac 2414
Query: 2051 gctatcctgagagacttacatataaataaaatgtcacattaatataaaaaagggaaaata 2110
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2413 gctatcct--gagacttacatataaataaaatgtcacattaatataaaaaagggaaaata 2356
Query: 2111 atatccatctgattc 2125
|||||||||||||||
Sbjct: 2355 atatccatctgattc 2341
>BF01038A2D06
Length = 312
Score = 236 bits (119), Expect = 1e-61
Identities = 221/255 (86%)
Strand = Plus / Plus
Query: 1871 tgaaacaaagcatctttattgtaatatctgttcgtcataacttcgttaaatataaaataa 1930
||||||||| ||||||| ||| || |||||||| ||||||||| |||||||||||||||
Sbjct: 34 tgaaacaaaacatcttttttggaaaatctgttccccataacttccttaaatataaaataa 93
Query: 1931 tacggaaaaggggactcttacaaaaataaacatcttcaataaatatagggacgagacgag 1990
||||||||||||||||||||||||||||||| ||||| |||||||||||||| | || |
Sbjct: 94 tacggaaaaggggactcttacaaaaataaacctcttccataaatatagggaccaaaccaa 153
Query: 1991 agagacacagtaaaccatagacatagagctggcggtctctaaggtgctctcgcgactaac 2050
| | || | ||||||| || ||||| |||||| ||||||||||| |||||| ||||||||
Sbjct: 154 aaaaaccccgtaaaccctaaacataaagctgggggtctctaaggggctctcccgactaac 213
Query: 2051 gctatcctgagagacttacatataaataaaatgtcacattaatataaaaaagggaaaata 2110
|| |||||| | |||||| | ||||||||||||| | ||||| ||||||||||||||||
Sbjct: 214 cctgtcctgaaaaacttacctttaaataaaatgtccccttaatttaaaaaagggaaaata 273
Query: 2111 atatccatctgattc 2125
|| ||| ||||||||
Sbjct: 274 atttccctctgattc 288
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,187
Number of extensions: 5624
Number of successful extensions: 5624
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5621
Number of HSP's successfully gapped: 2
Length of query: 2125
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2108
Effective length of database: 8,119,229
Effective search space: 17115334732
Effective search space used: 17115334732
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)