BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06072 (UTR included)
(1633 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_722_C1 1477 0.0
>BF14_722_C1
Length = 796
Score = 1477 bits (745), Expect = 0.0
Identities = 768/776 (98%)
Strand = Plus / Minus
Query: 377 gagtgaacactgaagtgtatttatttcataaacctattgaacttttattgtaacgtaatt 436
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 796 gagtgaacactgaagtgtatttatttcataaccctattgaacttttattgtaacgtaatt 737
Query: 437 tattttccttaccgtaaacttaattgttaaacaaacgttgacttgctcatacttacggta 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 tattttccttaccgtaaacttaattgttaaacaaacgttgacttgctcatacttacggta 677
Query: 497 tacaatgcaagatacgagaccagagttatatgaggaggtgaagctgtacagaaatgccag 556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 tacaatgcaagatacgagaccagagttatatgaggaggtgaagctgtacagaaatgccag 617
Query: 557 ggagagagaaaagcatgacaacatggccgaactctatgctgtggtcagcacccttcaaca 616
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ggagagggaaaagcatgacaacatggccgaactctatgctgtggtcagcacccttcaaca 557
Query: 617 tctagaaaaagcttacatgcgggactgtgtgcgtgcacaggagtacactgctgcctgcag 676
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tttagaaaaagcttacatgcgggactgtgtgcgtgcacaggagtacactgctgcctgcag 497
Query: 677 tcggttactcgtacaatacagagtagccttcaagcaagttaccggagaagagttcccaaa 736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tcggttactcgtacaatacagagtagccttcaagcaagttaccggagaagagttcccaaa 437
Query: 737 tattgaggcatttgttacaaaattcaggttagattgtccggcggcattagagaggataag 796
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tattgaggcatttgttacaaaattcaggttagattgtccggcggcattagagaggataag 377
Query: 797 ggagaacaaaccaaacctgattaaagatgacaaagggaacactaataaatatatcgctga 856
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 376 ggagaacaaaccaaacctgattaaagatgacaaaggaaacactaacaaatatatcgctga 317
Query: 857 aattgtatcgctgttcataacgttgatggataagttgcgcctggaattccgcgccatgga 916
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aattgtatcgctgttcataacgttgatggataagttgcgcctggaattccgcgccatgga 257
Query: 917 catgatccagccagagttacgtgacctccgggacaccatggaacgtctcaccatgctgcc 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 catgatccagccagagttacgtgacctccgggacaccatggaacgtctcaccatgctgcc 197
Query: 977 tgatgacttcgaggggaagctcaaggtccaagaatggctggacaagctgtcggagatgtc 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tgatgacttcgaggggaagctcaaggtccaagaatggctggacaagctgtcggagatgtc 137
Query: 1037 ggcttcagatgaactatcagagtcccaagtgcgacagctgctgtttgacctggaaacttc 1096
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 136 ggcttcagatgaactatcagagtcccaagtgcgacagctgctgtttgacctgggaacttc 77
Query: 1097 atatggagcgttcaacaaactactccacaaggattgattaaatgagactgttttag 1152
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 76 atatggagcgttcaacaaactactccacaagnattgattgaatgagactgttttag 21
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 206,050
Number of extensions: 4105
Number of successful extensions: 4105
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4105
Number of HSP's successfully gapped: 1
Length of query: 1633
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1616
Effective length of database: 8,119,229
Effective search space: 13120674064
Effective search space used: 13120674064
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)