BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06083 (UTR included)
(4017 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01055B2F03 131 9e-30
>BF01055B2F03
Length = 776
Score = 131 bits (66), Expect = 9e-30
Identities = 115/130 (88%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 1 tgtggtatcagaaatcttctggttcacacggcttggtgttcgttccgcggagtcagcagc 60
|||||| |||| | ||| ||||||||| |||| |||||| |||||||||||||||| ||
Sbjct: 612 tgtggtgtcaggagtctcctggttcacgcggcgcggtgttggttccgcggagtcagcggc 671
Query: 61 gttgctcgttatatgatattttatccatacaacgatgttgccccggcgatgttcatttat 120
|| |||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||
Sbjct: 672 gtcactcgttatatgatattctatccatacagcgatgtt-ccccggcgatgttcatttat 730
Query: 121 tttttaatat 130
||| ||||||
Sbjct: 731 tttataatat 740
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 364,657
Number of extensions: 6680
Number of successful extensions: 6680
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6679
Number of HSP's successfully gapped: 1
Length of query: 4017
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3999
Effective length of database: 8,109,745
Effective search space: 32430870255
Effective search space used: 32430870255
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)