BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06091 (UTR included)
(1819 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01009B1H08 1413 0.0
>BF01009B1H08
Length = 725
Score = 1413 bits (713), Expect = 0.0
Identities = 722/725 (99%)
Strand = Plus / Plus
Query: 354 agatctccaaatattacactgattattggttacccactgtgtttttaataacttagatcg 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agatctccaaatattacactgattattggttacccactgtgtttttaataacttagatcg 60
Query: 414 cggcttatgtttttacttagtgaagtataacatatattaaaaagttttaatttaatttca 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cggcttatgtttttacttagtgaagtataacatatattaaaaagttttaatttaatttca 120
Query: 474 cgttactgaagtttcacacaaaacaagatgtccgtgtgtttctttgtgccagccgaccaa 533
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cattactgaagtttcacacaaaacaagatgtccgtgtgtttctttgtgccagccgaccaa 180
Query: 534 gccggtacttcggctggttcagaggagacggaggtggatggggcagaggacgtacctcct 593
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gccggtacatcggctggttcagaggagacggaggtggatggggcagaggacgtacctcct 240
Query: 594 gagaacatccagagtactctccaggtgttctggaacaaggtcaatgaggatatgaagaag 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gagaacatccagagtactctccaggtgttctggaacaaggtcaatgaggatatgaagaag 300
Query: 654 attaactcggaggatttcaaaactcaagtcctgccgctcgctcgcataaagaagatcatg 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attaactcggaggatttcaaaactcaagtcctgccgctcgctcgcataaagaagatcatg 360
Query: 714 aagctggatgaagaggtgaagatgatatcggccgaggccccggttttgttcgcgaaagct 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aagctggatgaagaggtgaagatgatatcggccgaggccccggttttgttcgcgaaagct 420
Query: 774 gccgagatattcatacacgaactgacgttacgagcgtggtctcatactgaagacaataag 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gccgagatattcatacacgaactgacgttacgagcgtggtctcatactgaagacaataag 480
Query: 834 aggaggacgctacagcgtaatgacatagccatggctatatctaagtctgatcagttcgac 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aggaggacgctacagcgtaatgacatagccatggctatatctaagtctgatcagttcgac 540
Query: 894 ttcctcatagacatcgtccccagacacgaggtgaagccggctccagccaggagagacgag 953
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ttcctcatagacatcgtccccagacacgaggtgaagccggctccagccaggagagacgag 600
Query: 954 ccgaggcatgagacggtacaacagccgcatcagactccgataacacaaccacaatttgtc 1013
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ccgaggcatgagacggtacaacagccgcatcagactccgataacacaaccacaatttgtc 660
Query: 1014 attcagccgacggcgcagatagtacaacagcaacagcaatccagcagcacatcatcacag 1073
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 661 attcagccgacggcgcagatagtacaacagcaacagcaatccagcagcacatcctcacag 720
Query: 1074 cccgt 1078
|||||
Sbjct: 721 cccgt 725
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 246,387
Number of extensions: 6150
Number of successful extensions: 6150
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6150
Number of HSP's successfully gapped: 1
Length of query: 1819
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1802
Effective length of database: 8,119,229
Effective search space: 14630850658
Effective search space used: 14630850658
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)