BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06092 (UTR included)
(2113 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2945_C1 1683 0.0
>BF14_2945_C1
Length = 885
Score = 1683 bits (849), Expect = 0.0
Identities = 873/885 (98%)
Strand = Plus / Plus
Query: 169 tcggttgtgttacactgtcacatgtatatttgcgataaaagtaatcgaaaaattataatg 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcggttgtgttacactgtcacatgtatatttgcgataaaagtaatcgaaaaattataatg 60
Query: 229 aaaaatattttatcagtaaaaatgtcacgataacgcatggtatatcacttatctacgcgt 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aaaaatattttatcagtaaaaatgtcacgataacgcatggtatatcacttatctacgcgt 120
Query: 289 gtaagttgtcagagttctcgtgttatatcttttcagtgctatgatcgcatcataacgcac 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtaagttgtcagagttctcgtgttatatcttttcagtgctatgatcgcatcataacgcac 180
Query: 349 ggtacaagacacttgaaactagtcgatattatgtggccggaacgcgagaacgacaaaaga 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtacaagacacttgaaactagtcgatattatgtggccggaacgcgagaacgacaaaaga 240
Query: 409 atattacaattatgatgcctatggtgtacacagtatatggttttgccatattttttatga 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atattacaattatgatgcctatggtgtacacagtatatggttttgccatattttttatga 300
Query: 469 tcgcgtggatttgtttgtggctaatacacattatggctctgtcatattccaagtggaaat 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcgcgtggatttgtttgtggctaatacacattatggctctgtcatattccaagtggaaat 360
Query: 529 tacatcggactgtggaccggtctccgccggaacaaccgtacctcggcgtttctatcttga 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacatcggactgtggaccggtctccgccggaacaaccgtacctcggcgtttctatcttga 420
Query: 589 agccgctatctggtgtcgaccctaacctgttctctaacttggaaacgtttttttcgttag 648
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agccgctatctggtgtcgaccctaacctgttctctaacttggaaacgtttttttcgttag 480
Query: 649 actatccaacatacgaacttctattctgtgtggaaaacgaccatgacccggccgtgatgc 708
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actatccaacatacgaacttctattctgtgtggaaaacgaccatgacccggccgtgatgc 540
Query: 709 tcgttaacagcttaatgcacaagtttcctcaagtggacgcgaagttattcgtcggtggat 768
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcgttaacagcttaatgcacaagtttcctcaagtggacgcgaagttattcgtcggtggat 600
Query: 769 tgagagtcggtgtcaaccctaaaattaacaatatgcagccggcatatttggcggcaaaat 828
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgagagtcggtgtcaaccctaaaattaacaatatgcagccggcatatttggcggcaaaat 660
Query: 829 atcccttaatactagtgagtgattccggtatacgtatgcgagaagatacacttttagaca 888
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atcccttaatactagtgagtgattccggtatacgtatgcgagaagatacacttttagaca 720
Query: 889 tggtccagcatatgaaagaagacgtcgccatcgtacaccagatgccattctgttgtgacg 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tggtccagcatatgaaagaagacgtcgccatcgtacaccagatgccattctgttgtgacg 780
Query: 949 ctgacggtttcgcgtctgtttacgagaaggtctacttcgggacggcgcaggcgcgaatgt 1008
|||||||||||||||||||||||| |||||||||||||||||| ||||||||
Sbjct: 781 ctgacggtttcgcgtctgtttacgnnnnnntctacttcgggacggcgcnnnngcgaatgt 840
Query: 1009 atatgagtgcggatttcctgggcatcaattgtcatgtgggcatgt 1053
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 841 atatgnntgcggatttcctgggcatcaattgtcatgtgggcatgt 885
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 222,263
Number of extensions: 4412
Number of successful extensions: 4412
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4412
Number of HSP's successfully gapped: 2
Length of query: 2113
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2096
Effective length of database: 8,119,229
Effective search space: 17017903984
Effective search space used: 17017903984
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)