BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06119 (UTR included)
(2173 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_2965_C1 2226 0.0
BF01016B1A11 98 7e-20
BF01056B1D01 84 1e-15
BF01030A2C06 76 3e-13
>BF14_2965_C1
Length = 1198
Score = 2226 bits (1123), Expect = 0.0
Identities = 1179/1198 (98%)
Strand = Plus / Plus
Query: 408 ccatctgataatttctattcaacagcatactaagcttcgaaagggttaaacttggccatg 467
|||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ccatctgatattttctatttaacagcatactaagcttcgaaagggttaaacttggccatg 60
Query: 468 cattcactatttgcatgctagtgtttttgtatgatgtctaacatatccacaagttcgaaa 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cattcactatttgcatgctagtgtttttgtatgatgtctaacatatccacaagttcgaaa 120
Query: 528 aatcattccaagaaaaccaatagtcgagaacgtgataaaaataaatccatcgcttccgaa 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aatcattccaagaaaaccaatagtcgagaacgtgataaaaataaatccatcgcttccgaa 180
Query: 588 tctggcggttccagtcagtgtgatacgccgccacttattgaaaaggatgcgacatctcaa 647
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctggcggttccagtcagtgtgatacgccgccacttattgaaaaggatgcgacatctcaa 240
Query: 648 gggaggtttgcaggagtcggagcagattcagtgctgtgcatggccgagcagattggagcc 707
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gggaggtttgcaggagtcggagcagattcagtgctgtgcatggccgagcagattggagcc 300
Query: 708 gaaattaatactgaggcagctacgaacctcgctgaggacgtcagctataaactgcggcag 767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaaattaatactgaggcagctacgaacctcgctgaggacgtcagctataaactgcggcag 360
Query: 768 gttatcagtacaatcgcccttcacagcgagttgatgaaaaagtcgtgtgtggacagttgg 827
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 361 gttatcagtacaatcgcccttcacagcgagttgatgaaaaagtcatgtgtggacacttgg 420
Query: 828 gatgttaacactgtctttacattatcagacacaagtcctgtggtcggctcttgtttgcta 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gatgttaacactgtctttacattatcagacacaagtcctgtggtcggctcttgtttgcta 480
Query: 888 cagtatgtagctgtgggtgaagaaaaattgtgctgtgaagtagaaaatcttataaatata 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cagtatgtagctgtgggtgaagaaaaattgtgctgtgaagtagaaaatcttataaatata 540
Query: 948 tcagaatactcaatggtgacgcagagttatgtgttctcaacactgccgacagtctctgtt 1007
||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||
Sbjct: 541 tcagaatactcaatggtgacgcaaagctatgtgttctcaacactgccaacagtctctgtt 600
Query: 1008 gagtggataatagatgaaaagtgtttaaacaatagtagcagtataagtgcaaacttacaa 1067
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gagtggataatagatgaaaagtgtttaaacaatagtagcagtataagtgcaaacttacaa 660
Query: 1068 aactattatacaaaaattgctagagcgatattaaatctgaaaaggaaacctaaagagatt 1127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aactattatacaaaaattgctagagcgatattaaatctgaaaaggaaacctaaagagatt 720
Query: 1128 gccgtagaagatttagctacaaatacccgtattggtcccatatttccgaacctcttcaat 1187
|| |||||||||||||||||||| |||||||| ||||||||||||||||| || ||||||
Sbjct: 721 gcggtagaagatttagctacaaacacccgtatcggtcccatatttccgaatctattcaat 780
Query: 1188 ctggctgtgttagttcttaacgatgataatttaaatgccctgaatgtaccagcgaagaaa 1247
|||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 781 ttggctgtgttagttctaaacgatgataatttaaatgccctgaatgtgccagcgaagaaa 840
Query: 1248 ccattgcaatccaatgtgttggatatggtggatgctttgtgttccaacccatgcagcttg 1307
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 ccgttgcaatccaatgtgttggatatggtggatgctttgtgttccaacccatgcagcttg 900
Query: 1308 gacaccaacatacaacaacagtttcaaagattgttccctgtgatggtgtcaaatattttg 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 gacaccaacatacaacaacagtttcaaagattgttccctgtgatggtgtcaaatattttg 960
Query: 1368 ggcaacggttcgctagcagagaagatggttgccatactcactaaaatcacaagaacttgg 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 ggcaacggttcgctagcagagaagatggttgccatactcactaaaatcacaagaacttgg 1020
Query: 1428 ccatcttttatagccataggtaaaggcattctctttgactacttatctcagggtactaaa 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1021 ccatcttttatagccataggtaaaggcattctctttgactacttatctcagggcactaaa 1080
Query: 1488 gagagacttacagctcctatgatccgatgcgtgctggcgttgggccgacacgcgctggtc 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1081 gagagacttacagctcctatgatccgatgcgtgctggcgttgggccgacacgcgctggtc 1140
Query: 1548 gagtgtctgggggatcatctggaacatttggacgactgcgtgcaggcgcgtgtgggcg 1605
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct: 1141 gagtgtctgggggatcatctggaacatttgtacgactgngtgcaggcgcgtgtgggcg 1198
>BF01016B1A11
Length = 786
Score = 97.6 bits (49), Expect = 7e-20
Identities = 70/76 (92%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 2100 tagtatgttttcctcaagagatagacat--gccaccgcggacttttctgtagacctatat 2157
||||||||| |||| ||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 257 tagtatgttatccttaaggtatagacatatgccaccgcggacttttctgtagacctatat 316
Query: 2158 aagatacacaattcca 2173
||||||||||||||||
Sbjct: 317 aagatacacaattcca 332
>BF01056B1D01
Length = 838
Score = 83.8 bits (42), Expect = 1e-15
Identities = 90/105 (85%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 2070 tgccaatttttaaaagttgtaaaatggatatagtatgttttcctcaagagatagacat-- 2127
||||||||||||||| ||| |||||| ||||||||||| |||| ||| ||||||||
Sbjct: 532 tgccaatttttaaaacttggaaaatgtatatagtatgtaatccttaaggtatagacatat 591
Query: 2128 gccaccgcggacttttctgtagacctatataagatacacaattcc 2172
|||| || | ||||||||||||| |||||||||||||| ||||||
Sbjct: 592 gccatcgggaacttttctgtagatctatataagatacaaaattcc 636
>BF01030A2C06
Length = 599
Score = 75.8 bits (38), Expect = 3e-13
Identities = 89/105 (84%), Gaps = 2/105 (1%)
Strand = Plus / Plus
Query: 2070 tgccaatttttaaaagttgtaaaatggatatagtatgttttcctcaagagatagacat-- 2127
||||||||||||||| || |||||| ||||||||||| |||| ||| ||||||||
Sbjct: 204 tgccaatttttaaaacttagaaaatgtatatagtatgtaatccttaaggtatagacatat 263
Query: 2128 gccaccgcggacttttctgtagacctatataagatacacaattcc 2172
|||| || | ||||||||||||| |||||||||||||| ||||||
Sbjct: 264 gccatcgggaacttttctgtagatctatataagatacaaaattcc 308
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 251,500
Number of extensions: 4666
Number of successful extensions: 4666
Number of sequences better than 1.0e-10: 4
Number of HSP's gapped: 4664
Number of HSP's successfully gapped: 4
Length of query: 2173
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2156
Effective length of database: 8,119,229
Effective search space: 17505057724
Effective search space used: 17505057724
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)