BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06131 (UTR included)
(841 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01047B2H03 119 7e-27
BF01060B1D11 103 4e-22
>BF01047B2H03
Length = 758
Score = 119 bits (60), Expect = 7e-27
Identities = 124/144 (86%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 383 acaaagtaac-agagtagggttaggatcctgtaggaaggccaaagatatggatatattaa 441
|||||||||| |||||||| |||||||| | | ||||||| |||||| ||||||||| |
Sbjct: 593 acaaagtaacgagagtaggattaggatcaaggaagaaggcccaagatacggatatattga 534
Query: 442 aggcgtttattcggcaagacgagaatgataaatataagatccatgcaatgagctgagaaa 501
|| | |||||||||||||||||||||||| |||||| |||||||||||||| | ||| |
Sbjct: 533 agtcttttattcggcaagacgagaatgatggatataacatccatgcaatgagtttagata 474
Query: 502 tgcagaatgagtggctacacatag 525
||||||| |||||| || ||||||
Sbjct: 473 tgcagaacgagtggttagacatag 450
>BF01060B1D11
Length = 799
Score = 103 bits (52), Expect = 4e-22
Identities = 122/144 (84%), Gaps = 1/144 (0%)
Strand = Plus / Minus
Query: 383 acaaagtaac-agagtagggttaggatcctgtaggaaggccaaagatatggatatattaa 441
|||||||||| |||||||| |||||||| | | |||||| |||||||||||||||| |
Sbjct: 421 acaaagtaacgagagtaggattaggatcaaggaagaaggctcaagatatggatatattga 362
Query: 442 aggcgtttattcggcaagacgagaatgataaatataagatccatgcaatgagctgagaaa 501
|| ||||||| |||||||||||||||| ||||||||||||||||||| | | ||| |
Sbjct: 361 agtattttattcagcaagacgagaatgatggatataagatccatgcaatgcgtttagaga 302
Query: 502 tgcagaatgagtggctacacatag 525
||||||| |||||| || ||||||
Sbjct: 301 tgcagaacgagtggttagacatag 278
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 140,287
Number of extensions: 3450
Number of successful extensions: 3450
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 3450
Number of HSP's successfully gapped: 2
Length of query: 841
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 824
Effective length of database: 8,119,229
Effective search space: 6690244696
Effective search space used: 6690244696
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 33 (65.9 bits)