BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06142 (UTR included)
(1621 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01023B1D07 1520 0.0
>BF01023B1D07
Length = 784
Score = 1520 bits (767), Expect = 0.0
Identities = 782/786 (99%), Gaps = 2/786 (0%)
Strand = Plus / Plus
Query: 805 cactgctgttttttgaattgctgttccaagagatgttagtaagtcttcaggcaaaagatt 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactgctgttttttgaattgctgttccaagagatgttagtaagtcttcaggcaaaagatt 60
Query: 865 atgaagtgagcatgaaaaaaatatttacagtagcttatgaaggttctgtaaaaaagtatc 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 atgaagtgagcatgaaaaaaatatttacagtagcttatgaaggttctgtaaaaaaatatc 120
Query: 925 atagttggatcacacaacaactttttaattttatgtgtaaaatgtcacctacatttatac 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atagttggatcacacaacaactttttaattttatgtgtaaaatgtcacctacatttatac 180
Query: 985 aaatcctgaaatcatttgaggttgagaatgatcttaaaggctttgaaatgcaactagcaa 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaatcctgaaatcatttgaggttgagaatgatcttaaaggctttgaaatgcaactagcaa 240
Query: 1045 attttaatgcaactttacatggagtaagaagcaaaattgatgaattttttgaaaggaatc 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 attttaatgcaactttacatggagtaagaagcaaaattgatgaattttttgaaaggaatc 300
Query: 1105 ctgtttgtgatctataaataattatttattttatttatgacatattaatttaaaacagat 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctgtttgtgatctataaataattatttattttatttatgacatattaatttaaaacagat 360
Query: 1165 attgtatgagaaaataaatttctgtcaatacataaagtagatgtgtgtgtaaaaaaaaaa 1224
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 361 attgtatgagaaaataaatttctgtcaatacataaagtagatgtgtgtgt--aaaaaaaa 418
Query: 1225 cctgataacaatgacttttgtttacaatatttgttactacttatttgaatttaaaggtaa 1284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 cctgataacaatgacttttgtttacaatatttgttactacttatttgaatttaaaggtaa 478
Query: 1285 atggccactgataatgaaaattcagatgtgacatcttaaaggtttttttgtaactacaga 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 atggccactgataatgaaaattcagatgtgacatcttaaaggtttttttgtaactacaga 538
Query: 1345 ttattaagaaatatttgaaggtagaataaaaaaaatatattaagaaaacaaggatgttac 1404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ttattaagaaatatttgaaggtagaataaaaaaaatatattaagaaaacaaggatgttac 598
Query: 1405 aataagtaaatgacataagtatttttaaagtgattgtttggattagaatagaaagtaatt 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aataagtaaatgacataagtatttttaaagtgattgtttggattagaatagaaagtaatt 658
Query: 1465 gaaagagaagagataataatgagtattgtatatttacttaaagaaataagtatttaaaat 1524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gaaagagaagagataataatgagtattgtatatttacttaaagaaataagtatttaaaat 718
Query: 1525 acaaaatgtgtaagtatacaacataatgatgtagaacatgaattggccatagattcagtg 1584
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 719 acaaaatgtgtaagtatacaaaataatgatgtagaacatgaattggccatagattcagtg 778
Query: 1585 gtgctc 1590
||||||
Sbjct: 779 gtgctc 784
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 298,883
Number of extensions: 7064
Number of successful extensions: 7064
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7063
Number of HSP's successfully gapped: 1
Length of query: 1621
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1604
Effective length of database: 8,119,229
Effective search space: 13023243316
Effective search space used: 13023243316
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)