BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06154 (UTR included)
(3454 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A2D12 852 0.0
BF14_2966_C1 74 2e-12
>BF01019A2D12
Length = 437
Score = 852 bits (430), Expect = 0.0
Identities = 435/437 (99%)
Strand = Plus / Plus
Query: 2881 acgccgagtgtcccgtcagctcgtgcacgtgtcgctgcagcgagctggacccaccggacg 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acgccgagtgtcccgtcagctcgtgcacgtgtcgctgcagcgagctggacccaccggacg 60
Query: 2941 tgccgcgcgcctgacgtgcctcggcggtccgtccgttcccgtgttggtgccgggtgcgag 3000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgccgcgcgcctgacgtgcctcggcggtccgtccgttcccgtgttggtgccgggtgcgag 120
Query: 3001 tggtcggcgcgtcttctccgctcgggttcagggcttgaagcgcctagtcctcgtgttatc 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tggtcggcgcgtcttctccgctcgggttcagggcttgaagcgcctagtcctcgtgttatc 180
Query: 3061 ttccgttccgtagtctgtatatattatatgaatgttatattttcttacccaagggaagac 3120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttccgttccgtagtctgtatatattatatgaatgttatattttcttacccaagggaagac 240
Query: 3121 gacacgctcgagaatacgcgtcagatgccgtcagcagaccaaaagtaatagtgtgtttct 3180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gacacgctcgagaatacgcgtcagatgccgtcagcagaccaaaagtaatagtgtgtttct 300
Query: 3181 ttttaccaattgtcgtgtataaatacttgaccagtcaaaaacaggattggaaatataaac 3240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 301 ttttaccaattgtcgtgtataaatacttgaccagtcaaaaacaggattgtaaatataaac 360
Query: 3241 aagcgttcctacagcgtcacttcacagaatgacagttaactgttttccgttactactaaa 3300
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 361 aagcgttcctacagcgtcacttcacagaatgacagttanctgttttccgttactactaaa 420
Query: 3301 atctaatcattgttttt 3317
|||||||||||||||||
Sbjct: 421 atctaatcattgttttt 437
>BF14_2966_C1
Length = 1835
Score = 73.8 bits (37), Expect = 2e-12
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 1 ttttattgacttagttattgaatacaaatccttcttc 37
|||||||||||||||||||||||||||||||||||||
Sbjct: 38 ttttattgacttagttattgaatacaaatccttcttc 2
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 290,809
Number of extensions: 6350
Number of successful extensions: 6350
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6350
Number of HSP's successfully gapped: 2
Length of query: 3454
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3436
Effective length of database: 8,109,745
Effective search space: 27865083820
Effective search space used: 27865083820
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)