BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06163 (UTR included)
(2197 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062A1E07 1289 0.0
>BF01062A1E07
Length = 674
Score = 1289 bits (650), Expect = 0.0
Identities = 668/674 (99%)
Strand = Plus / Plus
Query: 1376 gcagttgaaactcaaccaggggtcgaacggcgagtctccgtcggagagtcctcggccagc 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagttgaaactcaaccaggggtcgaacggcgagtctccgtcggagagtcctcggccagc 60
Query: 1436 tcccgccaagaaggtccgccagctgccggagcaggcggcctccatgcacccctgcatgct 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcccgccaagaaggtccgccagctgccggagcaggcggcctccatgcacccctgcatgct 120
Query: 1496 gctgacctacatgagacctcagctcgcctacaggcagctggactcagacggagcgcggcc 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgacctacatgagacctcagctcgcctacaggcagctggactcagacggagcgcggcc 180
Query: 1556 ccaggacacggtattcaacgtcgcggtcgacgtggacggacagacgttcttcggaaaagc 1615
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ccaggacacgctattcaacgtcgcggtcgacgtggacggacagacgttcttcggaaaagc 240
Query: 1616 gtacagcaagaaggaggcccggcggatggcggctcgcctcgcctgcgagaccatctttgg 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gtacagcaagaaggaggcccggcggatggcggctcgcctcgcctgcgagaccatctttgg 300
Query: 1676 cgtcaagttcgactcgcagtgacggcggctgagtgacattgtgctatattatataaacag 1735
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 301 cgtcaagttcgactcgcagtgacggcggctgtgtgacattgtgctatattataaaaacag 360
Query: 1736 atccctggccatagccagtgcgtgaaatcccttccctttcaatactatgatgtatgttgc 1795
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atccctggccattgccagtgcgtgaaatcccttccctttcaatactatgatgtatgttgc 420
Query: 1796 agcaacgtgtttcctatcctaccagtgtggggcggtgatacgattcttccacattttcat 1855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agcaacgtgtttcctatcctaccagtgtggggcggtgatacgattcttccacattttcat 480
Query: 1856 gggaaaatccttcctgaagtcatattttaaagtgcaattaccttatgttgtaagtgatgg 1915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggaaaatccttcctgaagtcatattttaaagtgcaattaccttatgttgtaagtgatgg 540
Query: 1916 cagacgagtcatgaagaattgtgaatgtacattttcaaagggagtttttatttatgtaat 1975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cagacgagtcatgaagaattgtgaatgtacattttcaaagggagtttttatttatgtaat 600
Query: 1976 gaaataggagtttattttgcgccagtcgctagtttgactgatcgatgtgttggatacata 2035
|||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 601 gaaataggaggttattttgcgccagtcgctagtttgactgatcgacgtgttggatacata 660
Query: 2036 ttatacgtgagtga 2049
||||||||||||||
Sbjct: 661 ttatacgtgagtga 674
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 193,605
Number of extensions: 3339
Number of successful extensions: 3339
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3339
Number of HSP's successfully gapped: 1
Length of query: 2197
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2180
Effective length of database: 8,119,229
Effective search space: 17699919220
Effective search space used: 17699919220
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)