BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06170 (UTR included)
(6112 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040A1A01 1435 0.0
BF01019A1H08 78 2e-13
>BF01040A1A01
Length = 769
Score = 1435 bits (724), Expect = 0.0
Identities = 748/757 (98%)
Strand = Plus / Plus
Query: 295 atatcccctgactacctatataaaaagttttggaataggcggaaactttttgcatacgtc 354
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 13 atatcccctgactacctatataaaaagttttggaataggcggaaactttttccatacgtc 72
Query: 355 aactaactattatttatataagtataaatctatccgcgttgtatgatgacaaatatattg 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 aactaactattatttatataagtataaatctatccgcgttgtatgatgacaaatatattg 132
Query: 415 tagaaattattttgtcgtgtacacaggaacagttttaatgcacaatagtaatttaaattt 474
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 133 tagaaattatttagtcgtgtacacaggaacagttttaatgcacagtagtaatttaaattt 192
Query: 475 atatataaaggagttatgaaagagccatggatcatggacccgccaatcagacaaatgaac 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 atatataaaggagttatgaaagagccatggatcatggacccgccaatcagacaaatgaac 252
Query: 535 acaaaaacagtatcaatattgatgaggaccttttcgacgattctatcttggaaatttttg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 acaaaaacagtatcaatattgatgaggaccttttcgacgattctatcttggaaatttttg 312
Query: 595 aaaattcagattttgaggaaacagcagaacaaacaaaacatgaaaaaaataataccttaa 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aaaattcagattttgaggaaacagcagaacaaacaaaacatgaaaaaaataataccttaa 372
Query: 655 ataaaaatgcacttaatgttagtgcactgtgttgtgatgaagaactcaatggatatgata 714
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ataaaaatacacttaatgttagtgcactgtgttgtgatgaagaactcaatggatatgata 432
Query: 715 aaatgttaggaaagacatggatctatccaaccaactaccccatcagagattaccagttca 774
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aattgttaggaaagacatggatctatccaaccaactaccccatcagagattaccagttca 492
Query: 775 atattataaaggcagctatggtagaaaattgtctggtaagtctgcccactggattgggca 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 atattataaaggcagctatggtagaaaattgtctggtaagtctgcccactggattgggca 552
Query: 835 agacttttatagcagctgtgattatgtataatttttaccgatggtatccattaggtaagg 894
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 agacttttatagccgctgtgattatgtataatttttaccgatggtatccattaggtaagg 612
Query: 895 ttatattcatggcgcccacaaaacccttagtggcccagcagatagaagcctgctataata 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttatattcatggcgcccacaaaacccttagtggcccagcagatagaagcctgctataata 672
Query: 955 ttgttgccatgcctcctaaagataccattgaaatgacaggtcatatgcaagtcaacacta 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ttgttgccatgcctcctaaagataccattgaaatgacaggtcatatgcaagtcaacacta 732
Query: 1015 gaaaaagtcattggcaaacgaaaagagtattttttgc 1051
| |||||||||||||||||||||||||||||||||
Sbjct: 733 gnnnaagtcattggcaaacgaaaagagtattttttgc 769
>BF01019A1H08
Length = 504
Score = 77.8 bits (39), Expect = 2e-13
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 2071 gctcctctccctgcaacgcaatggacccggcacccgcacggtg 2113
||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 436 gctcctctccctgcaacgcgatggacccggcacccgcacggtg 394
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 118,996
Number of extensions: 14713
Number of successful extensions: 14713
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 14713
Number of HSP's successfully gapped: 2
Length of query: 6112
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 6094
Effective length of database: 8,109,745
Effective search space: 49420786030
Effective search space used: 49420786030
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)