BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06173 (UTR included)
(1498 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01025B1D02 1285 0.0
>BF01025B1D02
Length = 726
Score = 1285 bits (648), Expect = 0.0
Identities = 651/652 (99%)
Strand = Plus / Plus
Query: 568 agttgagaactgacgtcacacccaaaacatgcgagaacttcagggctctgtgtaccggtg 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52 agttgagaactgacgtcacacccaaaacatgcgagaacttcagggctctgtgtaccggtg 111
Query: 628 aaaagggtttcggctacaagggctccactttccaccgcgtcatccccaacttcatgttgc 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 aaaagggtttcggctacaagggctccactttccaccgcgtcatccccaacttcatgttgc 171
Query: 688 aaggaggtgacttcacaaaccacaatggtactggtggaaagtctatctacggtgagaagt 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 aaggaggtgacttcacaaaccacaatggtactggtggaaagtctatctacggtgagaagt 231
Query: 748 ttaccgatgagaacttcgtcctgaagcacactggccccggtgttctgtctatggccaatg 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 ttaccgatgagaacttcgtcctgaagcacactggccccggtgttctgtctatggccaatg 291
Query: 808 ccggtcccaacaccaacggctctcaattcttcatcactactctcaaaacctcttggttag 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ccggtcccaacaccaacggctctcaattcttcatcactactctcaaaacctcttggttag 351
Query: 868 atggcaggcatgttgtctttggtaatgtggttgaaggcatggatgttgttaagaagatcg 927
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 atggcaggcatgttgtcttcggtaatgtggttgaaggcatggatgttgttaagaagatcg 411
Query: 928 aatccatgggctcccaatctggaaagccatcccgcaagattgtcatcactgactgtggac 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 aatccatgggctcccaatctggaaagccatcccgcaagattgtcatcactgactgtggac 471
Query: 988 aactctcttaaaaatactgtaatattatagaaactaactgcaatattttaagtttaatgt 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aactctcttaaaaatactgtaatattatagaaactaactgcaatattttaagtttaatgt 531
Query: 1048 tatgtcctcctaagtaataccttcccagtcataaaattaccatatatttgaagtttactg 1107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tatgtcctcctaagtaataccttcccagtcataaaattaccatatatttgaagtttactg 591
Query: 1108 tgggtcattccaattatgttataaaatttataactatgctatattttgcaaactacaaaa 1167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tgggtcattccaattatgttataaaatttataactatgctatattttgcaaactacaaaa 651
Query: 1168 tgcatttactcctgtgcattgtttattcataataaattaacttatataatga 1219
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 tgcatttactcctgtgcattgtttattcataataaattaacttatataatga 703
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 236,682
Number of extensions: 5356
Number of successful extensions: 5356
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5356
Number of HSP's successfully gapped: 1
Length of query: 1498
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1481
Effective length of database: 8,119,229
Effective search space: 12024578149
Effective search space used: 12024578149
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)