BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06193 (UTR included)
(1573 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01040B2C06 1516 0.0
>BF01040B2C06
Length = 847
Score = 1516 bits (765), Expect = 0.0
Identities = 817/838 (97%)
Strand = Plus / Plus
Query: 178 caggtaacgcaaatgatggggaagaattatcttcaaacaggtgcgattccccaatagggc 237
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 10 caggtaacgcaaatgatgggnnntaattatcttcaaacaggtgcgattccccaatagggc 69
Query: 238 ataatccggaggaatccgatatagatgatgatatatcggtcggagacaatcgttcagaga 297
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 70 ataatccggaggaatccgatatagatgatgatatatctgtcggagacaatcgttcagaga 129
Query: 298 catctactcccaaaaagattcaagttaattatgacaatgacatcgaaaactacaagagaa 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 catctactcccaaaaagattcaagttaattatgacaatgacatcgaaaactacaagagaa 189
Query: 358 aaaatgacaattgtaccaaaggagttgaatccgatcacgaacgatcaacgccaacagaat 417
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 190 aaaatgacaattgtaccaaaggagttgaatcagatcacgaacgatcaacgccaacagaat 249
Query: 418 ttaattcaaaccgtatatccaattctgaattctcttcaccatataaagaggatgaccatg 477
||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 250 ttaattcgaaccgtatatccaattctgaattctcttcaccgtataaagaggatgaccatg 309
Query: 478 aatatgagagacaagaagagtccatgaagttgtatgagggatccctgtttcaattatata 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aatatgagagacaagaagagtccatgaagttgtatgagggatccctgtttcaattatata 369
Query: 538 gaccggaaagagaagggaacaaggagggtgagagcgcatttgaaatcgctggctctattt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaccggaaagagaagggaacaaggagggtgagagcgcatttgaaatcgctggctctattt 429
Query: 598 cggacagcatctacggaagatcaatggacctaaccaaaaactcatttcaatcgcagctgc 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cggacagcatctacggaagatcaatggacctaaccaaaaactcatttcaatcgcagctgc 489
Query: 658 tcgctggttttgcttccgttatggcgggtagttcacagagggattcacaggatccaacag 717
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tcgctggttttgcttccgttatggcgggtagttcacagagggattcacaggatccaacag 549
Query: 718 atcgtcagtcctcgggtcgaaatggaagttcctcgaactccggtcgcaagcctcgtcggc 777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 550 atcgtcagtcctcgggtcgaaatggaagttcctcgaactccggtcgcaagcctcgtcgac 609
Query: 778 gtcgcacagcattcacacacgcacagttggcctacttggagcgcaagtttaggtgtcaga 837
|||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 610 gtcgtacagcattcacacacgcacagttggcctacttggagcgcaagtttagatgtcann 669
Query: 838 aatacttgagcgtcgctgaccgaggggacgtcgctgatgctctcaacctcagtgaaacac 897
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 nntacttgagcgtcgccgaccgaggggacgtcgctgatgctctcaacctcagtgaaacac 729
Query: 898 aagttaaaacgtggtatcagaacagaagaacaaaatggaagagacaaaaccagcttcgtc 957
|||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 730 aagttaaaacgtggtatcagaacagannanncaaatggaagagacaaaaccagcttcgtc 789
Query: 958 tcgagcagcttcgggcgcaagcggctagcggcgaacgcgagctgtctgcgcacgcgct 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 tcgagcagcttcgggcgcaagcggctagcggcgaacgcgagctgtctgcgcacgcgct 847
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 168,729
Number of extensions: 3261
Number of successful extensions: 3261
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3261
Number of HSP's successfully gapped: 1
Length of query: 1573
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1556
Effective length of database: 8,119,229
Effective search space: 12633520324
Effective search space used: 12633520324
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)