BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06200 (UTR included)
(1411 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01050A2C03 755 0.0
>BF01050A2C03
Length = 437
Score = 755 bits (381), Expect = 0.0
Identities = 417/428 (97%), Gaps = 7/428 (1%)
Strand = Plus / Minus
Query: 964 atgacctcgcatcccctatatatacccgggttagtccttgtggtacggcctgtatatagt 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atgacctcgcatcccctatatatacccgggttagtccttgtggtacggcctgtatatagt 378
Query: 1024 tccaattacataagtattaatctgacgttccaaattcaaactgcccaccccccc------ 1077
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tccaattacataagtattaatctgacgttccaaattcaaactgcccaccccccccccccc 318
Query: 1078 acttcacaaattgtatgatttcaagtcccacgacggcgccactgtacggctgcgggatac 1137
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 317 acttcacaaattgtatgatttcaagtcccacgatggcgccactgtacggctgcgggatac 258
Query: 1138 tgttactatacagataaatatttttcctactgattcatacaaacaacgcggttcaaagaa 1197
|||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 257 tgttactatacatataaatatttttcctactgtttcatacaaacaacgcggttcaaagaa 198
Query: 1198 atgtaatgtttggagatcaattggtgacaatacaataaagtagtagactaagaagatata 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 atgtaatgtttggagatcaattggtgacaatacaataaagtagtagactaagaagatata 138
Query: 1258 cgtaagagattgccattagcgatatacagaagcttgtctcggtgggatgaggtgtgat-t 1316
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 137 cgtaagagattgccattagcgatatacagaagcttgtctcggtgggatgaggtgtgatct 78
Query: 1317 tagtgtttaaagttatggagcgatacaaacaatatatatatgagtcaaataatatcaata 1376
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 77 tagtgtttaaagttatggagcgatacaaacaatatatatatgagtccaataatatcaata 18
Query: 1377 tagatatc 1384
||||||||
Sbjct: 17 tagatatc 10
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 183,357
Number of extensions: 4310
Number of successful extensions: 4310
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 4309
Number of HSP's successfully gapped: 2
Length of query: 1411
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1394
Effective length of database: 8,119,229
Effective search space: 11318205226
Effective search space used: 11318205226
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)