BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06218 (UTR included)
(2038 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01057A1F04 706 0.0
BF01053B1E12 533 e-151
>BF01057A1F04
Length = 826
Score = 706 bits (356), Expect = 0.0
Identities = 368/372 (98%)
Strand = Plus / Plus
Query: 499 aggaggtagattacacggataaatccgaagattgtccacatcctaaattcaagaggattc 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aggaggtagattacacggataaatccgaagattgtccacatcctaaattcaagaggattc 451
Query: 559 tgaagctgttgggacatttggaccgtgaagccaggatatgggacaagcttccactaagct 618
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 452 tgaagctgttgggacatttggaccgtgaagccaggatatgggacaagcttccgctaagct 511
Query: 619 gtcacacagcagttgagataagaatcgcttcaactcacacggattggagaggaagaggct 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gtcacacagcagttgagataagaatcgcttcaactcacacggattggagaggaagaggct 571
Query: 679 taatgagagttctcgtagaggaatcagagcggatagctagagaaatcggcgccggcgcag 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 taatgagagttctcgtagaggaatcagagcggatagctagagaaatcggcgccggcgcag 631
Query: 739 tgcgtatggatacgacctctgcgttttccgcggccgcggccgagcgactcaactacaaaa 798
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 632 tgcgtatggatacgacctctgccttttccgcagccgcggccgagcgactcaactacaaaa 691
Query: 799 atgtctacggtttgttttactccgacctgccttacgcaccacatccggaccctccccatc 858
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 692 atgtctacggtttgttttactccgacctgccttacgcaccacatccggaccctccccacc 751
Query: 859 tagaagctaggg 870
||||||||||||
Sbjct: 752 tagaagctaggg 763
>BF01053B1E12
Length = 746
Score = 533 bits (269), Expect = e-151
Identities = 269/269 (100%)
Strand = Plus / Plus
Query: 499 aggaggtagattacacggataaatccgaagattgtccacatcctaaattcaagaggattc 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aggaggtagattacacggataaatccgaagattgtccacatcctaaattcaagaggattc 537
Query: 559 tgaagctgttgggacatttggaccgtgaagccaggatatgggacaagcttccactaagct 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 tgaagctgttgggacatttggaccgtgaagccaggatatgggacaagcttccactaagct 597
Query: 619 gtcacacagcagttgagataagaatcgcttcaactcacacggattggagaggaagaggct 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gtcacacagcagttgagataagaatcgcttcaactcacacggattggagaggaagaggct 657
Query: 679 taatgagagttctcgtagaggaatcagagcggatagctagagaaatcggcgccggcgcag 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 taatgagagttctcgtagaggaatcagagcggatagctagagaaatcggcgccggcgcag 717
Query: 739 tgcgtatggatacgacctctgcgttttcc 767
|||||||||||||||||||||||||||||
Sbjct: 718 tgcgtatggatacgacctctgcgttttcc 746
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 278,346
Number of extensions: 5958
Number of successful extensions: 5958
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5958
Number of HSP's successfully gapped: 2
Length of query: 2038
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2021
Effective length of database: 8,119,229
Effective search space: 16408961809
Effective search space used: 16408961809
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)