BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06229 (UTR included)
(4108 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01049A1D06 1550 0.0
>BF01049A1D06
Length = 790
Score = 1550 bits (782), Expect = 0.0
Identities = 788/790 (99%)
Strand = Plus / Plus
Query: 3019 ggtcaaacattttgcctttatcggttaatttagattgccatcataactgcccagagttga 3078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggtcaaacattttgcctttatcggttaatttagattgccatcataactgcccagagttga 60
Query: 3079 atgcctgtattcctattacattatggtgtgatggcagtcctcattgcccttctggttacg 3138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgcctgtattcctattacattatggtgtgatggcagtcctcattgcccttctggttacg 120
Query: 3139 atgaagatgactcaaactgttcttttaagttgtccttgccgtcaccatatgttgcggcag 3198
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acgaagatgactcaaactgttcttttaagttgtccttgccgtcaccatatgttgcggcag 180
Query: 3199 tggccggtatgggacttcttatttgtgctatcgcaattggtttatgtgcatgtaaacgac 3258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tggccggtatgggacttcttatttgtgctatcgcaattggtttatgtgcatgtaaacgac 240
Query: 3259 gaagaaaaaaagataaggagtttaaggcaagactcgacgacgcgcttccacctgaagaaa 3318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaagaaaaaaagataaggagtttaaggcaagactcgacgacgcgcttccacctgaagaaa 300
Query: 3319 gaccttatgatcgttcaaaaagtaatggcgttccagaagctaatcgtcaatacgcaactg 3378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gaccttatgatcgttcaaaaagtaatggcgttccagaagctaatcgtcaatacgcaactg 360
Query: 3379 tacaaaaatatgctacaatagataaatacagtttaagtcaaaaatatagtgcggggctca 3438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tacaaaaatatgctacaatagataaatacagtttaagtcaaaaatatagtgcggggctca 420
Query: 3439 atgatgttaggtattatgatgaagtagctcaaaaagataagctagccgacacgaggtatg 3498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgatgttaggtattatgatgaagtagctcaaaaagataagctagccgacacgaggtatg 480
Query: 3499 ctagcttagggcgcgctggtcggtgtaatcgaatggaaaataatagaggcactggatcta 3558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctagcttagggcgcgctggtcggtgtaatcgaatggaaaataatagaggcactggatcta 540
Query: 3559 gaagaatgccagacgtaggctatccagatctaaaagacggattttgttgacccttatctc 3618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gaagaatgccagacgtaggctatccagatctaaaagacggattttgttgacccttatctc 600
Query: 3619 gatgacttagaaaccccagaacagctattaaagctacttatagcctaaagctttgatttt 3678
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatgacttaaaaaccccagaacagctattaaagctacttatagcctaaagctttgatttt 660
Query: 3679 gtcaagttacgtttattaataacctttatattgaagactgaactggcaaaagtgcctccc 3738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gtcaagttacgtttattaataacctttatattgaagactgaactggcaaaagtgcctccc 720
Query: 3739 taacagttttgaacaattgtttagtcacaattttcatacgagataaacagaatattaatc 3798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 taacagttttgaacaattgtttagtcacaattttcatacgagataaacagaatattaatc 780
Query: 3799 aatattaata 3808
||||||||||
Sbjct: 781 aatattaata 790
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 423,111
Number of extensions: 6957
Number of successful extensions: 6957
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6957
Number of HSP's successfully gapped: 1
Length of query: 4108
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 4090
Effective length of database: 8,109,745
Effective search space: 33168857050
Effective search space used: 33168857050
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)