BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06261 (UTR included)
(3256 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01030B2H08 1294 0.0
>BF01030B2H08
Length = 685
Score = 1294 bits (653), Expect = 0.0
Identities = 677/685 (98%)
Strand = Plus / Plus
Query: 1620 cttcaggatgcggaggtcgcacgagctgatgttggggaggtgctgcttgtgggggggatg 1679
|||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1 cttcaggatgcggaagtcgcacgagctgatgtcggggaggtgctgcttgtgggggggatg 60
Query: 1680 actaggatgcccaaggttcagcagacggtgcaggagatcttcggtagggctccgtcgcga 1739
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 accaggatgcccaaggttcagcagacggtgcaggagatcttcggtagggctccgtcgcga 120
Query: 1740 gctgtcaaccctgacgaggctgtggccgtgggcgctgcggtccagggcggagtgctggcc 1799
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgtcaaccctgacgaggctgtggccgtgggcgctgcggtccagggcggagtgctggct 180
Query: 1800 ggtgacgtcactgacatcctactcctcgacgtgacacccctgtccctcggcatagagacg 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtgacgtcactgacatcctactcctcgacgtgacacccctgtccctcggcatagagacg 240
Query: 1860 ctcggaggagtgttcacaaagctcatcacaaggaacacaaccatcccgaccaagaagagt 1919
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctcggaggagtgttcacaaagctcatcacaaggaacacaaccatcccgaccaagaagagt 300
Query: 1920 caggtgttctccacagccgccgacgggcagacccaggtggagatcaaagtgcatcagggt 1979
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caggtgttctcgacagccgccgacgggcagacccaggtggagatcaaagtgcatcagggt 360
Query: 1980 gaacgtgagatggcctcggacaacaagctgttggggcagttctcgttggttggtatacca 2039
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gaacgtgagatggcctcggacaacaagctgttggggcagttctcgttggttggtatacca 420
Query: 2040 ccagcgccgaggggtgttccgcagattgaggtgacgttcgacattgacgccaacggtatc 2099
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ccagcaccgaggggtgttccgcagattgaggtgacgttcgacattgacgccaacggtatc 480
Query: 2100 gtgcatgtatcagccagggacaagggtaccggcaaggagcagcagatcgtcatccaatcg 2159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gtgcatgtatcagccagggacaagggtaccggcaaggagcagcagatcgtcatccaatcg 540
Query: 2160 tccggtggtctgtcgaaggatgagatcgagaacatggtgaaggcggctgagcagttcgca 2219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tccggtggtctgtcgaaggatgagatcgagaacatggtgaaggcggctgagcagttcgca 600
Query: 2220 gcggcggataagaccaggcgagaacgggtggaggcttgcaaccaggcggagggagtgctc 2279
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gcggcggataagaccaggcgggaacgggtggaggcttgcaaccaggcggagggagtgctc 660
Query: 2280 cacgacacagagaccaagatggacg 2304
|||||||| ||||||||||||||||
Sbjct: 661 cacgacacggagaccaagatggacg 685
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 426,896
Number of extensions: 21757
Number of successful extensions: 21757
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 21757
Number of HSP's successfully gapped: 1
Length of query: 3256
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 3238
Effective length of database: 8,109,745
Effective search space: 26259354310
Effective search space used: 26259354310
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)