BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06298 (UTR included)
(2404 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01033A1A07 1546 0.0
BF14_1811_C1 1126 0.0
>BF01033A1A07
Length = 780
Score = 1546 bits (780), Expect = 0.0
Identities = 780/780 (100%)
Strand = Plus / Plus
Query: 69 gtgatcacttgtttgtttgacctggcgatactatagtgcaagtttttgaccgtatttgct 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gtgatcacttgtttgtttgacctggcgatactatagtgcaagtttttgaccgtatttgct 60
Query: 129 agataaccacttattttatctgtaataattagttcaatatctattctgataaaagcagag 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agataaccacttattttatctgtaataattagttcaatatctattctgataaaagcagag 120
Query: 189 ctcaaaacgctattgtatatcttacatttataaaaaaaaatacgcagtggtcatcgtggt 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctcaaaacgctattgtatatcttacatttataaaaaaaaatacgcagtggtcatcgtggt 180
Query: 249 gagcagatcgtcattaagaaatcgaggtaattataaaataccaaaatgcctaggaaagtt 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gagcagatcgtcattaagaaatcgaggtaattataaaataccaaaatgcctaggaaagtt 240
Query: 309 ttcgtagttggtgttgggatgacgaagtttgttaagcccaatagcggcatggattatcca 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttcgtagttggtgttgggatgacgaagtttgttaagcccaatagcggcatggattatcca 300
Query: 369 gatttagggaaggaagctgtcgaggcagctttggccgacgctcgtataaagtaccaagac 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gatttagggaaggaagctgtcgaggcagctttggccgacgctcgtataaagtaccaagac 360
Query: 429 gtacaacaggctatatgcgggtatgttttcggtgattctacaagcggtcagcgagtatta 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtacaacaggctatatgcgggtatgttttcggtgattctacaagcggtcagcgagtatta 420
Query: 489 tatcagattggcatgactggtattcctatatataacgttaataacaattgctccactggt 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tatcagattggcatgactggtattcctatatataacgttaataacaattgctccactggt 480
Query: 549 tctaacgcactattccttggaaaacaactcgtagaaggtggtgtttcggatgttattctg 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctaacgcactattccttggaaaacaactcgtagaaggtggtgtttcggatgttattctg 540
Query: 609 gctcttggattcgagaaaatgacaccaggtgctctaggcaatggtacattttcagacaga 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gctcttggattcgagaaaatgacaccaggtgctctaggcaatggtacattttcagacaga 600
Query: 669 acgaatcctttagatagacatactctcaagatggcggatatggcagaattaactgcagct 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 acgaatcctttagatagacatactctcaagatggcggatatggcagaattaactgcagct 660
Query: 729 ccgatgaccgctcaatacttcggtaacgcgggtgcagagcacatgaagaaatatggtacg 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ccgatgaccgctcaatacttcggtaacgcgggtgcagagcacatgaagaaatatggtacg 720
Query: 789 actgaagtccatatagccaaaatagcagctaagaaccatcgtcatggtgctaagaaccca 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 actgaagtccatatagccaaaatagcagctaagaaccatcgtcatggtgctaagaaccca 780
>BF14_1811_C1
Length = 812
Score = 1126 bits (568), Expect = 0.0
Identities = 580/584 (99%)
Strand = Plus / Plus
Query: 1399 aggtgccccgagctcgcatcgccttacaacacaacctaggactcggaggagctgtcgtca 1458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 aggtgccccgagctcgcatcgccttacaacacaacctaggactcggaggagctgtcgtca 288
Query: 1459 tcaccatgtaccgtaaaggattcagcagtgcatcacccaaccaggtggctgccatcgcag 1518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tcaccatgtaccgtaaaggattcagcagtgcatcacccaaccaggtggctgccatcgcag 348
Query: 1519 ccaacccagagaacttcaaagtatacaaatacatgaagatcctcgaggaagccatgaagt 1578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 ccaacccagagaacttcaaagtatacaaatacatgaagatcctcgaggaagccatgaagt 408
Query: 1579 ctgatgaagataaactcatagagaaagttagaggagtttatggttttaaggttaggaacg 1638
|||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 409 ctgatgaagataaactcatagagaaagttagaggagtttatggtttcaaggttagaaacg 468
Query: 1639 gaccgaacggcgaagaaggttactgggtcatcaacgccaaggaagggaagggcagtgtga 1698
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 469 gaccgaacggcgaagaaggttactgggtcatcaacgccaaggaaggaaagggcagtgtga 528
Query: 1699 actatgacggtaaagacaaatgtgatgtgaccttcacaatcaacgatgaggatgtcgctg 1758
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 actacgacggtaaagacaaatgtgatgtgaccttcacaatcaacgatgaggatgtcgctg 588
Query: 1759 atctgatatccggaaaactgaatccccagaaggcatttttccaaggaaaaatcaaaatcc 1818
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 atctgatatccggaaaactgaatccccagaaggcatttttccaaggaaaaatcaaaatcc 648
Query: 1819 agggtaacatgggactcgctatgaagctgaccgatctccagagatccgctgctggcagga 1878
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 agggtaacatgggactcgctatgaagctgaccgatctccagagatccgctgctggcagga 708
Query: 1879 ttgaagcaatccgctccaaactataagattctggttttcaattatcaccggtttctatta 1938
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ttgaagcaatccgctccaaactataagattctggttttcaattatcaccggtttctatta 768
Query: 1939 tactgggctaaggaaatggtctttgggcatttatagataactct 1982
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 tactgggctaaggaaatggtctttgggcatttatagataactct 812
Score = 412 bits (208), Expect = e-114
Identities = 228/232 (98%), Gaps = 2/232 (0%)
Strand = Plus / Plus
Query: 47 tttcgcgaaaggccgtggtcacgtgatcacttgtttgtttgacctggcgatactatagtg 106
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcgcgaaaggccgcggtcacgtgatcacttgtttgtttgacctggcgatactatagtg 60
Query: 107 caagtttttga-ccgtatttgctagataaccacttattttatctgtaataattagttcaa 165
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 61 caagtttttgaaccgtatttgctagataaccacttattttatctctaataattagttcaa 120
Query: 166 tatctattctgataaaagcagagctcaaaacgctattgtatatcttacatttat-aaaaa 224
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 tatctattctgataaaagcagagctcaaaacgctattgtatatcttacatttataaaaaa 180
Query: 225 aaaatacgcagtggtcatcgtggtgagcagatcgtcattaagaaatcgaggt 276
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaatacgcagtggtcatcgtggtgagcagatcgtcattaagaaatcgaggt 232
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 282,062
Number of extensions: 6464
Number of successful extensions: 6464
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 6462
Number of HSP's successfully gapped: 3
Length of query: 2404
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2387
Effective length of database: 8,119,229
Effective search space: 19380599623
Effective search space used: 19380599623
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)