BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06358 (UTR included)
(1939 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_277_C1 519 e-147
BF14_277_C2 100 2e-20
>BF14_277_C1
Length = 1260
Score = 519 bits (262), Expect = e-147
Identities = 262/262 (100%)
Strand = Plus / Plus
Query: 1585 cagtgtccggaagtggccgtgggtggtatctacggtgtactgaacagacggcgcggtcac 1644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 cagtgtccggaagtggccgtgggtggtatctacggtgtactgaacagacggcgcggtcac 761
Query: 1645 gtgttcgaggagtcccaggtggctggtacgcccatgttcgtggtgaaggcctacctgccc 1704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gtgttcgaggagtcccaggtggctggtacgcccatgttcgtggtgaaggcctacctgccc 821
Query: 1705 gtaaacgagtcgttcgggttcaccgccgacctccgctccaacaccggcggacaggccttc 1764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 gtaaacgagtcgttcgggttcaccgccgacctccgctccaacaccggcggacaggccttc 881
Query: 1765 ccgcagtgcgtgttcgaccactggcagatcctccccggtgaccccagcgaacccggcagc 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 882 ccgcagtgcgtgttcgaccactggcagatcctccccggtgaccccagcgaacccggcagc 941
Query: 1825 aaaccattcgccgtcgttcagg 1846
||||||||||||||||||||||
Sbjct: 942 aaaccattcgccgtcgttcagg 963
>BF14_277_C2
Length = 819
Score = 99.6 bits (50), Expect = 2e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 1639 ggtcacgtgttcgaggagtcccaggtggctggtacgcccatgttcgtggt 1688
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 770 ggtcacgtgttcgaggagtcccaggtggctggtacgcccatgttcgtggt 819
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 238,664
Number of extensions: 5805
Number of successful extensions: 5805
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 5805
Number of HSP's successfully gapped: 2
Length of query: 1939
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1922
Effective length of database: 8,119,229
Effective search space: 15605158138
Effective search space used: 15605158138
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)