BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06364 (UTR included)
(2584 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01058B1E07 1291 0.0
>BF01058B1E07
Length = 766
Score = 1291 bits (651), Expect = 0.0
Identities = 666/671 (99%)
Strand = Plus / Plus
Query: 494 agtcaaaatgacggtcgagggtgtcatggtgtcctacaactattcggatgacgcggaaca 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 agtcaaaatgacggtcgagggtgtcatggtgtcctacaactattcggatgacgcggaaca 122
Query: 554 cgcgaacatactgacagtgtcggcatcaggaataaagttctccaagcgatgggttctcac 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cgcgaacatactgacagtgtcggcatcaggaataaagttctccaagcgatgggttctcac 182
Query: 614 gcacggttcaatattgtcgccactaaaacaggccaacgttatcaagaacgctcgaggcaa 673
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 gcacggttcaatattatcgccactaaaacaggccaacgttatcaagaacgctcgaggcaa 242
Query: 674 acccattttaaacgacgagttctatgacaaccttccggaaatatacgtcacctgtgagaa 733
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gcccattttaaacgacgagttctatgacaaccttccggaaatatacgtcacctgtgagaa 302
Query: 734 ggttaaatccaagacaccaaacatgtacgagaacctcgagatcctgagcagagagagatc 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggttaaatccaagacaccaaacatgtacgagaacctcgagatcctgagcagagagagatc 362
Query: 794 gcttaacaacgatgctgacttggaacatagcagctatcaagttagagtgctcactggaag 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gcttaacaacgatgctgacttggaacatagcagctatcaagttagagtgctcactggaag 422
Query: 854 gatatgccacgtgtggcaatgtcctgtgctggatcgctgcgtggacaacatcctgtacag 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gatatgccacgtgtggcaatgtcctgtgctggatcgctgcgtggacaacatcctgtacag 482
Query: 914 ttggaccatcggtcaccgggacggagacgtggagaaacagacgcagctggggaaggcgct 973
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 483 ttggaccatcggtcaccgggacggagacgtggagaaacagacgcagctcgggaaggcgct 542
Query: 974 gctttccgtgttcgtgctggtagacctggagacggataatagagattttaagatcctgag 1033
||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||
Sbjct: 543 gctttccgtgttcgtgctggtagacctagagatggataatagagattttaagatcctgag 602
Query: 1034 gccgctgtctgagctactggacatgtgtcagccgccgcccgaccgcggcgccaccgtcga 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gccgctgtctgagctactggacatgtgtcagccgccgcccgaccgcggcgccaccgtcga 662
Query: 1094 catacattccacgccctttggatgcgaggtgttcctgaacgcggtgactcgtggctccgt 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 catacattccacgccctttggatgcgaggtgttcctgaacgcggtgactcgtggctccgt 722
Query: 1154 gtgtggtgtcg 1164
|||||||||||
Sbjct: 723 gtgtggtgtcg 733
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 291,691
Number of extensions: 6484
Number of successful extensions: 6484
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6484
Number of HSP's successfully gapped: 1
Length of query: 2584
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2567
Effective length of database: 8,119,229
Effective search space: 20842060843
Effective search space used: 20842060843
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)