BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06365 (UTR included)
(5899 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01061B1G01 759 0.0
>BF01061B1G01
Length = 785
Score = 759 bits (383), Expect = 0.0
Identities = 423/435 (97%), Gaps = 1/435 (0%)
Strand = Plus / Plus
Query: 5441 tatgtatgagagccattacaagaacattctaaccaactcatggctggaacaacgccgctt 5500
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1 tatgtatgagagccattacaagaacattctaaccaactcatggctggaataacgccgctt 60
Query: 5501 gtgtggatgagaacatcattttttcacttgtgtataaacgatcttaaattttataagtta 5560
|| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtatcgatgagaacatcattttttcacttgtgtataaacgatcttaaattttataagtta 120
Query: 5561 aagttacgtgatgcacgtcagtttcgtacccaccctaacgtctcgtgttgctcgcattat 5620
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagttacgtgatgcacgtcagttccgtacccaccctaacgtctcgtgttgctcgcattat 180
Query: 5621 tatacattgtgataatttatcgtcacaagtttg-atactacattagttttagtttcctcc 5679
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 181 tatacattgtgataatttatcgtcacaagtttgaattctacattagttttagtttcctcc 240
Query: 5680 aacattcccgtaacgtcagtcatgttacaagtctcacttcaaatagtcatgtattaaaat 5739
|||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 241 aacattcccgtaacgtcagtcatgttacaagtctcatttcacatagtcatgtattaaaat 300
Query: 5740 gatctcaaactgtcaaaatcattttgacacgaacaaatatgtcacagtagagcatttagt 5799
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 301 gatctcaaactgtcaaaatcattttgacacgaacaaatatgtcattgtagagcatttagt 360
Query: 5800 tttttaaataaactgactcgtattttgatgaatttagattttggttagtttagtatcgaa 5859
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 361 tttttaaataaactgactcgtattttgatgaatatagattttggttagtttagtatcgaa 420
Query: 5860 agtatattacataca 5874
| |||||||||||||
Sbjct: 421 aatatattacataca 435
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 504,513
Number of extensions: 9526
Number of successful extensions: 9526
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 9525
Number of HSP's successfully gapped: 1
Length of query: 5899
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 5881
Effective length of database: 8,109,745
Effective search space: 47693410345
Effective search space used: 47693410345
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 35 (69.9 bits)