BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06368 (UTR included)
(2611 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01014A2B08 1407 0.0
>BF01014A2B08
Length = 788
Score = 1407 bits (710), Expect = 0.0
Identities = 731/738 (99%), Gaps = 1/738 (0%)
Strand = Plus / Plus
Query: 732 atatatattattaaaaataagagcggtctacacgcgcgagacaggaagcttcgtgctcac 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atatatattattaaaaataagagcggtctacacgcgcgagacaggaagcttcgtgctcac 107
Query: 792 agacgcaccgacgatgtttacaaggggaagataaaccagctcatgataactctgacgtct 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 agacgcaccgacgatgtttacaaggggaagataaaccagctcatgataactctgacgtct 167
Query: 852 ccctgcgaggagtatccgcattttgatatgattgaaagctacaatctaagtgttgctgat 911
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 ccctgcgaggaatatccgcattttgatatgattgaaagctacaatctaagtgttgctgat 227
Query: 912 acatcgcagctcacgagtacctcaatatggggagtgttgcgaggccttgagacattttca 971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 acatcgcagctcacgagtacctcaatatggggagtgttgcgaggccttgagacattttca 287
Query: 972 caactattttatctctccaatgatcgaaatgagctgtatatcaataaaacggatataatt 1031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 caactattttatctctccaatgatcgaaatgagctgtatatcaataaaacggatataatt 347
Query: 1032 gatttccctcgttacaaacaccggggtatcctgttggatacttcccgacattacgctacc 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gatttccctcgttacaaacaccggggtatcctgttggatacttcccgacattacgctacc 407
Query: 1092 acatcaacaattcttaaactgttagaatctatatccattaataaaatgaatgtttttcac 1151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 acatcaacaattcttaaactgttagaatctatatccattaataaaatgaatgtttttcac 467
Query: 1152 tggcatattgttgatgatcaaagttttccttatcagagtgagaagtttccagaaataagt 1211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tggcatattgttgatgatcaaagttttccttatcagagtgagaagtttccagaaataagt 527
Query: 1212 gaacgtggtgcttatgattcttctatggtgtacacgaaagaagacatccttatgatcata 1271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gaacgtggtgcttatgattcttctatggtgtacacgaaagaagacatccttatgatcata 587
Query: 1272 gattttgcaagaaatcgtggaatacgggtcatcccggaatttgatgttcccggacacact 1331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gattttgcaagaaatcgtggaatacgggtcatcccggaatttgatgttcccggacacact 647
Query: 1332 gcgtcctggggcctcgcataccccggtgttctaacggagtgttacaaccagcaacagatg 1391
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gcgtcctnnngnctcgcataccccggtgttctaacggagtgttacaaccagcaacagatg 707
Query: 1392 gtgggcctcggccccatggatcccacc-aaaaatataacttacaaactcctcgctgatct 1450
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 708 gtgggcctcggccccatggatcccaccaaaaaatataacttacaaactcctcgctgatct 767
Query: 1451 gttcgctgaagtacagga 1468
|||| |||||||||||||
Sbjct: 768 gttcactgaagtacagga 785
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 348,761
Number of extensions: 11046
Number of successful extensions: 11046
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 11045
Number of HSP's successfully gapped: 1
Length of query: 2611
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2594
Effective length of database: 8,119,229
Effective search space: 21061280026
Effective search space used: 21061280026
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)