BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06372 (UTR included)
(1654 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1887_C1 1358 0.0
>BF14_1887_C1
Length = 1242
Score = 1358 bits (685), Expect = 0.0
Identities = 688/689 (99%)
Strand = Plus / Plus
Query: 302 aatctgcattctgcatctattagtctatggctattgttttgtgtactgttttgcgtgtta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aatctgcattctgcatctattagtctatggctattgttttgtgtactgttttgcgtgtta 60
Query: 362 cgcttactataaatttaggaaaatattaaagcttttgaattgaaataagtgaatattcac 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgcttactataaatttaggaaaatattaaagcttttgaattgaaataagtgaatattcac 120
Query: 422 atgtacatgtcgctaaagaatctcgaaagaatttaataacatttggcatcgtaatattat 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgtacatgtcgctaaagaatctcgaaagaatttaataacatttggcatcgtaatattat 180
Query: 482 tcatataatatccacaaagatgcagagaaaaccaggataccctgctaccgctaataatat 541
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 181 tcatataatatccacaaagatgcagagaaaaccaggataccctgctatcgctaataatat 240
Query: 542 gaaaatggagcttggtttgggaatggaatacgttgcgcaatgtgattttgcatctgaaag 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaaaatggagcttggtttgggaatggaatacgttgcgcaatgtgattttgcatctgaaag 300
Query: 602 ccaatgtgatgacgatgagacgcaacagcgccgacagcagctaataaactttggacattc 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ccaatgtgatgacgatgagacgcaacagcgccgacagcagctaataaactttggacattc 360
Query: 662 tcagtgggggttcaataattggagttggttggttacttcacaagccttagattttgtcga 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tcagtgggggttcaataattggagttggttggttacttcacaagccttagattttgtcga 420
Query: 722 aaatcataatggcatatacacagctggtgttgcatgttttgtgtccgttaaagtaaaaag 781
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaatcataatggcatatacacagctggtgttgcatgttttgtgtccgttaaagtaaaaag 480
Query: 782 tctggatatacaacgagttaatgtgggctatgcaacatcagtagcagcctataaaggact 841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctggatatacaacgagttaatgtgggctatgcaacatcagtagcagcctataaaggact 540
Query: 842 ctctattcatagagcaaggatgtgctctgtgacaaatggtcttctcgaaactcttttgag 901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctctattcatagagcaaggatgtgctctgtgacaaatggtcttctcgaaactcttttgag 600
Query: 902 ttttggtggaaatcttgcttcagaactaatggaactcctcgaaagtaacaaaaatgaggc 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 ttttggtggaaatcttgcttcagaactaatggaactcctcgaaagtaacaaaaatgaggc 660
Query: 962 agcaaaccacatcatggtgcctgaagctg 990
|||||||||||||||||||||||||||||
Sbjct: 661 agcaaaccacatcatggtgcctgaagctg 689
Score = 507 bits (256), Expect = e-143
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 1193 ttcgtcccaactccaacgtaagtttcgtgatgatgccgccgctgtacgctcccccccgct 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 987 ttcgtcccaactccaacgtaagtttcgtgatgatgccgccgctgtacgctcccccccgct 1046
Query: 1253 tgcctccgccgcacgccttccccaactactacgagctgagtccctggcatttctcgtacg 1312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1047 tgcctccgccgcacgccttccccaactactacgagctgagtccctggcatttctcgtacg 1106
Query: 1313 agcctcacaatctcaacttgaatctcaacatgccgtcccggaaccttctcgttggtcgtg 1372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1107 agcctcacaatctcaacttgaatctcaacatgccgtcccggaaccttctcgttggtcgtg 1166
Query: 1373 actgcaagcgcgaggacttccagcctcagcagggctgttggatcaaacccaccatattct 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 actgcaagcgcgaggacttccagcctcagcagggctgttggatcaaacccaccatattct 1226
Query: 1433 acgacgggttctggac 1448
||||||||||||||||
Sbjct: 1227 acgacgggttctggac 1242
Score = 307 bits (155), Expect = 3e-83
Identities = 155/155 (100%)
Strand = Plus / Plus
Query: 990 gcccatccgatgcccgccaacctggcaatcaacatgtcaacgaatctcccaaatcctccg 1049
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 gcccatccgatgcccgccaacctggcaatcaacatgtcaacgaatctcccaaatcctccg 901
Query: 1050 acgaccccggccgctaacttgccgcccgccgccaacgctccccggccaccctacgccgcg 1109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 acgaccccggccgctaacttgccgcccgccgccaacgctccccggccaccctacgccgcg 961
Query: 1110 ccgcccgcccccgcccccgcccacgttcgtcccaa 1144
|||||||||||||||||||||||||||||||||||
Sbjct: 962 ccgcccgcccccgcccccgcccacgttcgtcccaa 996
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 169,458
Number of extensions: 3490
Number of successful extensions: 3490
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 3488
Number of HSP's successfully gapped: 3
Length of query: 1654
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1637
Effective length of database: 8,119,229
Effective search space: 13291177873
Effective search space used: 13291177873
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)