BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06393 (UTR included)
(2716 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 133 2e-30
BF14_335_C2 117 1e-25
BF01049B1F01 109 2e-23
BF14_335_C4 103 1e-21
BF01014B2F02 88 9e-17
BF01016B1E06 84 1e-15
BF01016A2B02 82 5e-15
BF01047B2H03 82 5e-15
BF14_335_C5 76 3e-13
BF01045B1A06 70 2e-11
BF01044B1A07 68 8e-11
>BF01019A1H08
Length = 504
Score = 133 bits (67), Expect = 2e-30
Identities = 88/95 (92%)
Strand = Plus / Minus
Query: 659 agataggttccccttaaacctacacctgggtcgcaagtaccaggcactgttgaagctcct 718
||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||
Sbjct: 490 agataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctcct 431
Query: 719 ctccctgcaacgcagtgaacccggcacccgcacgg 753
||||||||||||| || |||||||||||||||||
Sbjct: 430 ctccctgcaacgcgatggacccggcacccgcacgg 396
>BF14_335_C2
Length = 1827
Score = 117 bits (59), Expect = 1e-25
Identities = 77/83 (92%)
Strand = Plus / Minus
Query: 671 cttaaacctacacctgggtcgcaagtaccaggcactgttgaagctcctctccctgcaacg 730
|||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgcaacg 863
Query: 731 cagtgaacccggcacccgcacgg 753
| | | |||||||||||||||||
Sbjct: 862 cggcggacccggcacccgcacgg 840
>BF01049B1F01
Length = 840
Score = 109 bits (55), Expect = 2e-23
Identities = 61/63 (96%)
Strand = Plus / Minus
Query: 668 ccccttaaacctacacctgggtcgcaagtaccaggcactgttgaagctcctctccctgca 727
||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 649 ccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
Query: 728 acg 730
|||
Sbjct: 589 acg 587
>BF14_335_C4
Length = 1491
Score = 103 bits (52), Expect = 1e-21
Identities = 62/64 (96%), Gaps = 1/64 (1%)
Strand = Plus / Plus
Query: 668 ccccttaaacctacacctgggtcgcaagtaccaggcactgttgaagctcctctccctgca 727
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 1248 ccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctct-cctgca 1306
Query: 728 acgc 731
||||
Sbjct: 1307 acgc 1310
>BF01014B2F02
Length = 623
Score = 87.7 bits (44), Expect = 9e-17
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Minus
Query: 679 tacacctgggtcgcaagtaccaggcactgttgaagctcctctccctgcaacgcagtgaac 738
|||||||||||||||||| | |||| ||| ||||||||||||||||||||||| || ||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgc--tggac 566
Query: 739 ccggcacccgcacgg 753
|||||||||||||||
Sbjct: 565 ccggcacccgcacgg 551
>BF01016B1E06
Length = 606
Score = 83.8 bits (42), Expect = 1e-15
Identities = 57/62 (91%)
Strand = Plus / Minus
Query: 668 ccccttaaacctacacctgggtcgcaagtaccaggcactgttgaagctcctctccctgca 727
||||||||||||||||||||||||| | | || ||||||||||||||||||||| |||||
Sbjct: 254 ccccttaaacctacacctgggtcgctactccccggcactgttgaagctcctctctctgca 195
Query: 728 ac 729
||
Sbjct: 194 ac 193
>BF01016A2B02
Length = 780
Score = 81.8 bits (41), Expect = 5e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 671 cttaaacctacacctgggtcgcaagtaccaggcactgttgaagctcctctccctgcaacg 730
||||| |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||
Sbjct: 283 cttaagcctacacctgagtcgcaattcccaggcactgttgaagctcctctcccttcaacg 224
Query: 731 c 731
|
Sbjct: 223 c 223
>BF01047B2H03
Length = 758
Score = 81.8 bits (41), Expect = 5e-15
Identities = 85/100 (85%), Gaps = 6/100 (6%)
Strand = Plus / Minus
Query: 420 ggttttgtgagagaaggcattagggctacaaaatcaaacgtcaagatttactctatcatt 479
|||||||||||||||| ||||||||||| ||| |||||| ||||| |||||||||| ||
Sbjct: 180 ggttttgtgagagaagacattagggctataaagtcaaacatcaagccttactctatcctt 121
Query: 480 aaag------cggattggactataatgatggatacgtatg 513
|||| ||||||| |||||||| |||||||||||||
Sbjct: 120 aaagcggtttcggattgcactataatcatggatacgtatg 81
>BF14_335_C5
Length = 1597
Score = 75.8 bits (38), Expect = 3e-13
Identities = 72/84 (85%), Gaps = 2/84 (2%)
Strand = Plus / Plus
Query: 670 ccttaaacctacacctgggtcgcaagtaccaggcactgttgaagctcctctccctgcaac 729
|||||||||||||| |||||||| ||||||||||||||||||||||||| |||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaaa 1557
Query: 730 gcagtgaacccggcacccgcacgg 753
| || |||||||||||||||||
Sbjct: 1558 g--atgcacccggcacccgcacgg 1579
>BF01045B1A06
Length = 820
Score = 69.9 bits (35), Expect = 2e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 700 aggcactgttgaagctcctctccctgcaacgcagtgaacccggcacccgca 750
|||||||||||||||||||||||||||||| || || |||| |||||||||
Sbjct: 740 aggcactgttgaagctcctctccctgcaacacaatggaccccgcacccgca 690
>BF01044B1A07
Length = 806
Score = 67.9 bits (34), Expect = 8e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 680 acacctgggtcgcaagtaccaggcactgttgaagctcctctccctgcaacgcagtgaacc 739
|||||||| |||| ||| |||| ||| |||||||||||||||||||| |||| || |||
Sbjct: 532 acacctggttcgcgagtcccagacacagttgaagctcctctccctgccacgcgatggacc 473
Query: 740 cggcacccgcacgg 753
|| |||||||||||
Sbjct: 472 cgccacccgcacgg 459
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 232,770
Number of extensions: 4199
Number of successful extensions: 4199
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 4197
Number of HSP's successfully gapped: 11
Length of query: 2716
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2699
Effective length of database: 8,119,229
Effective search space: 21913799071
Effective search space used: 21913799071
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)