BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06396 (UTR included)
(2422 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1765_C1 1094 0.0
>BF14_1765_C1
Length = 927
Score = 1094 bits (552), Expect = 0.0
Identities = 599/614 (97%), Gaps = 1/614 (0%)
Strand = Plus / Plus
Query: 1810 ctggagtctcacctcacatctccaaactcatcaaaatctgcatgaacgaggaccctggga 1869
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 1 ctggcgtctcacctcacatctccaaactcatcaaaatctgcatgaatgaggaccctggga 60
Query: 1870 aacgaccctccttcgaaatgatacttcccatactagaaaagatgaaacgctgataaatct 1929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aacgaccctccttcgaaatgatacttcccatactagaaaagatgaaacgctgataaatct 120
Query: 1930 tatcaaatgacgacggtgaagtacttttagctaacatatgaatattaaaatccaaatgta 1989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatcaaatgacgacggtgaagtacttttagctaacatatgaatattaaaatccaaatgta 180
Query: 1990 tccatcac-tttttgtaacaatgaagtaataacaaagaattcttatctcagtgatgctgt 2048
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tccatcnnntttttgtaacaatgaagtaataacaaagaattcttatctcagtgatgctgt 240
Query: 2049 cctgaattttctctatgttgtagaacataaatatatatgacaataaaacattaaaactat 2108
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 241 cctgaattttctctttgttgtagaacataaatatatatgacaataaaatattaaaactat 300
Query: 2109 cttcaatgttaaaaaatgttgacagtgccattaccccttcaaaccctgccaccaaatatt 2168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcaatgttaaaaaatgttgacagtgccattaccccttcaaaccctgccaccaaatatt 360
Query: 2169 ttagtttttaaatgttgtaaaaaaaggaaatgagcataagtttgaagggaataaagtgat 2228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttagtttttaaatgttgtaaaaaaaggaaatgagcataagtttgaagggaataaagtgat 420
Query: 2229 agttgtacgaaaacaatcacaaaacacaagcttatttactgccactccatgttgttagaa 2288
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 421 agttgtacgaaaacaatcacaaaacacaagcatatttactgccactccatgttgttagac 480
Query: 2289 ataggttgtatttttgaagattttcgtttatttagacttgtattaatttaattcaaaagt 2348
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||||
Sbjct: 481 ataggttgtatttttgaagattttcatttatttagacttctattaatttaattcataagt 540
Query: 2349 ttattttgaaaaactaatttattaaattttatattatataaaaaatatatatatttctcc 2408
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 541 ttattttgaaaaactaatttattaaattttatattaaataaaaaaaatatatatttctcc 600
Query: 2409 ctaaaatataaata 2422
|||||||| |||||
Sbjct: 601 ctaaaataaaaata 614
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 307,063
Number of extensions: 7199
Number of successful extensions: 7199
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 7197
Number of HSP's successfully gapped: 1
Length of query: 2422
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2405
Effective length of database: 8,119,229
Effective search space: 19526745745
Effective search space used: 19526745745
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)