BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06438 (UTR included)
(1432 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01062B2B07 121 3e-27
BF14_1695_C1 90 1e-17
BF01061B1E05 84 7e-16
BF14_729_C3 82 3e-15
BF01049B2H03 76 2e-13
BF01058B2C06 68 4e-11
>BF01062B2B07
Length = 761
Score = 121 bits (61), Expect = 3e-27
Identities = 136/161 (84%)
Strand = Plus / Plus
Query: 765 ggtctgatctacgaggagacaagaggagtgctgaagatattcctggagaacgtgatcaga 824
|||||||| ||||| ||||| ||||| || || || ||||||| |||||||| ||| |
Sbjct: 234 ggtctgatatacgaagagaccagaggcgttctcaaagtattcctagagaacgtcatccgc 293
Query: 825 gacgccgtcacctacacggaacacgccaagaggaagacggtcaccgccatggacgtggtg 884
||||||||||| ||||| || ||||| ||||||||||| ||||| ||||||||||| |||
Sbjct: 294 gacgccgtcacgtacaccgagcacgcgaagaggaagaccgtcacagccatggacgtcgtg 353
Query: 885 tacgccctcaagagacagggtcggacgctatacggcttcgg 925
|||||||| ||| ||||||| || || |||||||| |||||
Sbjct: 354 tacgccctgaagcgacagggacgcaccctatacggtttcgg 394
>BF14_1695_C1
Length = 1407
Score = 89.7 bits (45), Expect = 1e-17
Identities = 48/49 (97%)
Strand = Plus / Minus
Query: 351 tactagtttcatttaaatgaatactcacgaaaatcttagatctcattac 399
|||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1067 tactagtttcatttaaatgaatactcgcgaaaatcttagatctcattac 1019
>BF01061B1E05
Length = 745
Score = 83.8 bits (42), Expect = 7e-16
Identities = 45/46 (97%)
Strand = Plus / Plus
Query: 350 atactagtttcatttaaatgaatactcacgaaaatcttagatctca 395
||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9 atactagtttcatttaaatgaatactcgcgaaaatcttagatctca 54
>BF14_729_C3
Length = 2041
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 348 taatactagtttcatttaaatgaatactcacgaaaatcttagatctcat 396
||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 1681 taatactagcttcatttaaatgaatactcgcgaaaatcttagatctcat 1729
>BF01049B2H03
Length = 832
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 349 aatactagtttcatttaaatgaatactcacgaaaatcttagatctcatta 398
|||| ||||||||||||||||||||||| | |||||||||||||||||||
Sbjct: 305 aatattagtttcatttaaatgaatactcgctaaaatcttagatctcatta 354
>BF01058B2C06
Length = 772
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 349 aatactagtttcatttaaatgaatactcacgaaaatcttagatctc 394
|||| |||||||||||||||||||||| |||||||| |||||||||
Sbjct: 492 aatattagtttcatttaaatgaatactaacgaaaattttagatctc 537
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 180,712
Number of extensions: 3842
Number of successful extensions: 3842
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 3842
Number of HSP's successfully gapped: 6
Length of query: 1432
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 1415
Effective length of database: 8,119,229
Effective search space: 11488709035
Effective search space used: 11488709035
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)