BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06440 (UTR included)
(2539 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF14_1127_C1 1501 0.0
>BF14_1127_C1
Length = 869
Score = 1501 bits (757), Expect = 0.0
Identities = 778/785 (99%)
Strand = Plus / Plus
Query: 533 gatccgaagtcatcaacgtacgccgtctgggtcccgggactttaaagaggcgaccaaacg 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85 gatccgaagtcatcaacgtacgccgtctgggtcccgggactttaaagaggcgaccaaacg 144
Query: 593 tgatgctctggctcgtctggaagtggaactcgagagacttctgtctaccgtccccgagcc 652
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 145 tgatgctctggctcgtctggaagtggaactcgagagacttctgtctacagtccccgagcc 204
Query: 653 caaacagcccctagtggagaaagagttcgcgggattcaagaatctattcagcaggttcct 712
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 caaacagcccctagtggagaaagagttcgcgggattcaagaatctattcagcaggttcct 264
Query: 713 cgctgaacagggtccgtctgttacgtgggagaaaatccagaagcttccagaacatgccgt 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgctgaacagggtccgtctgttacgtgggagaaaatccagaagcttccagaacatgccgt 324
Query: 773 catcgattacaccacgcttcagactcctaccaccgatagcattcaccacatgctggataa 832
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 325 cattgattacaccacgcttcagactcctaccacagatagcattcaccacatgctggataa 384
Query: 833 gttggtggtggtgaaactgaacggtggcctgggaacctccatgggctgtaaaggacccaa 892
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gctggtggtggtgaaactgaacggtggcctgggaacctccatgggctgtaaaggacccaa 444
Query: 893 gtcggtcatccaagtcagaaatgaactgaccttcctcgatctgactgtgcaacaaattga 952
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtcggtcatccaagtcagaaatgaactgaccttcctcgatctgactgtgcaacaaattga 504
Query: 953 gcatctgaacaagacgtacaaatgcaacgttcccctggtgctcatgaactctttcaacac 1012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcatctgaacaagacgtacaaatgcaacgttcccctggtgctcatgaactctttcaacac 564
Query: 1013 tgacgaggacacgctcaaggtcatccgcaagtaccgcggtctgaagctcgatatccacac 1072
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 565 tgacgaggacacgctcaaggtcatccgcaagtaccgcggcctgaagctcgacatccacac 624
Query: 1073 cttcaaccagtcctgccatcccaggatcaacagggaatccttactgccgctggccaaaga 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cttcaaccagtcctgccatcccaggatcaacagggaatccttactgccgctggccaaaga 684
Query: 1133 cgctgacgtacactcggatatcgaggcttggtacccgcctggtcacggagacttctacga 1192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cgctgacgtacactcggatatcgaggcttggtacccgcctggtcacggagacttctacga 744
Query: 1193 atctttctacaattctggtcttctgaataaatttattaaagagggcaggacgtactgctt 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 atctttctacaattctggtcttctgaataaatttattaaagagggcaggacgtactgctt 804
Query: 1253 catcagcaacatagataatttgggggcgaacgtcgatctgaacatcctcaacctgttgtt 1312
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 catcagcaacatagataatctgggggcgaacgtcgatctgaacatcctcaacctgttgtt 864
Query: 1313 gaatc 1317
|||||
Sbjct: 865 gaatc 869
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 276,497
Number of extensions: 5794
Number of successful extensions: 5794
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 5794
Number of HSP's successfully gapped: 1
Length of query: 2539
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2522
Effective length of database: 8,119,229
Effective search space: 20476695538
Effective search space used: 20476695538
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)