BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06444 (UTR included)
(2053 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01019A1H08 133 1e-30
BF01016A2B02 107 7e-23
BF01049B1F01 103 1e-21
BF14_335_C4 101 4e-21
BF01043B1E03 92 4e-18
BF14_335_C2 90 2e-17
BF01014B2F02 84 1e-15
BF01016B1E06 82 4e-15
BF14_335_C5 80 2e-14
>BF01019A1H08
Length = 504
Score = 133 bits (67), Expect = 1e-30
Identities = 85/90 (94%), Gaps = 2/90 (2%)
Strand = Plus / Minus
Query: 1482 ttagataggatccccttaaacctacacctgggtcgcaagtcccaagcactgttgaagctc 1541
|||||||||| ||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 492 ttagataggagccccttaaacctacacctgggtcgcaactcccaggcactgttgaagctc 433
Query: 1542 ctctccctgca--gcgatggacccggcacc 1569
||||||||||| |||||||||||||||||
Sbjct: 432 ctctccctgcaacgcgatggacccggcacc 403
>BF01016A2B02
Length = 780
Score = 107 bits (54), Expect = 7e-23
Identities = 122/141 (86%), Gaps = 4/141 (2%)
Strand = Plus / Minus
Query: 1438 tcaaatttggtcagg-agagaggggcttggacggtggaggtgacgttagataggatcccc 1496
||||||||||| ||| ||||||| | |||||||| |||||||| |||||||||| || |
Sbjct: 341 tcaaatttggttaggtagagaggagtttggacggcggaggtga-gttagataggggcctc 283
Query: 1497 ttaaacctacacctgggtcgcaagtcccaagcactgttgaagctcctctccctgca--gc 1554
|||| |||||||||| ||||||| ||||| ||||||||||||||||||||||| || ||
Sbjct: 282 ttaagcctacacctgagtcgcaattcccaggcactgttgaagctcctctcccttcaacgc 223
Query: 1555 gatggacccggcaccgcacgg 1575
| ||||||||||| ||||||
Sbjct: 222 gcgggacccggcacagcacgg 202
>BF01049B1F01
Length = 840
Score = 103 bits (52), Expect = 1e-21
Identities = 58/60 (96%)
Strand = Plus / Minus
Query: 1493 ccccttaaacctacacctgggtcgcaagtcccaagcactgttgaagctcctctccctgca 1552
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 649 ccccttacacctacacctgggtcgcaagtcccaggcactgttgaagctcctctccctgca 590
>BF14_335_C4
Length = 1491
Score = 101 bits (51), Expect = 4e-21
Identities = 54/55 (98%)
Strand = Plus / Plus
Query: 1493 ccccttaaacctacacctgggtcgcaagtcccaagcactgttgaagctcctctcc 1547
||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1248 ccccttaaacctacacctgggtcgcaagtcccaggcactgttgaagctcctctcc 1302
>BF01043B1E03
Length = 830
Score = 91.7 bits (46), Expect = 4e-18
Identities = 79/90 (87%)
Strand = Plus / Plus
Query: 1480 cgttagataggatccccttaaacctacacctgggtcgcaagtcccaagcactgttgaagc 1539
||||||||||| ||| ||||||||| |||||||| |||||||||||||||| ||| | |
Sbjct: 379 cgttagataggggccctttaaacctatacctgggttgcaagtcccaagcactattggacc 438
Query: 1540 tcctctccctgcagcgatggacccggcacc 1569
||||||||| ||| ||||||||||| ||||
Sbjct: 439 tcctctcccagcaacgatggacccgtcacc 468
>BF14_335_C2
Length = 1827
Score = 89.7 bits (45), Expect = 2e-17
Identities = 54/57 (94%)
Strand = Plus / Minus
Query: 1496 cttaaacctacacctgggtcgcaagtcccaagcactgttgaagctcctctccctgca 1552
|||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 922 cttaaacctacacctgtgtcgcaaatcccaggcactgttgaagctcctctccctgca 866
>BF01014B2F02
Length = 623
Score = 83.8 bits (42), Expect = 1e-15
Identities = 60/66 (90%)
Strand = Plus / Minus
Query: 1504 tacacctgggtcgcaagtcccaagcactgttgaagctcctctccctgcagcgatggaccc 1563
|||||||||||||||||||| | || ||| ||||||||||||||||||| || |||||||
Sbjct: 623 tacacctgggtcgcaagtcctaggcgctgctgaagctcctctccctgcaacgctggaccc 564
Query: 1564 ggcacc 1569
||||||
Sbjct: 563 ggcacc 558
>BF01016B1E06
Length = 606
Score = 81.8 bits (41), Expect = 4e-15
Identities = 66/73 (90%), Gaps = 1/73 (1%)
Strand = Plus / Minus
Query: 1480 cgttagataggatccccttaaacctacacctgggtcgcaagtcccaagcactgttgaagc 1539
||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||
Sbjct: 266 cgttagataggg-ccccttaaacctacacctgggtcgctactccccggcactgttgaagc 208
Query: 1540 tcctctccctgca 1552
||||||| |||||
Sbjct: 207 tcctctctctgca 195
>BF14_335_C5
Length = 1597
Score = 79.8 bits (40), Expect = 2e-14
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 1495 ccttaaacctacacctgggtcgcaagtcccaagcactgttgaagctcctctccctgcagc 1554
|||||||||||||| |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 1498 ccttaaacctacacnnnnntcgcaagtcccaggcactgttgaagctcctctccgtgcaaa 1557
Query: 1555 gatggacccggcacc 1569
|||| ||||||||||
Sbjct: 1558 gatgcacccggcacc 1572
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 303,071
Number of extensions: 28428
Number of successful extensions: 28428
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 28426
Number of HSP's successfully gapped: 10
Length of query: 2053
Length of database: 8,280,457
Length adjustment: 17
Effective length of query: 2036
Effective length of database: 8,119,229
Effective search space: 16530750244
Effective search space used: 16530750244
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)