BLASTN 2.2.24 [Aug-08-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DPGLEAN06457 (UTR included)
(3013 letters)
Database: est
9484 sequences; 8,280,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BF01059B2B05 702 0.0
>BF01059B2B05
Length = 656
Score = 702 bits (354), Expect = 0.0
Identities = 363/366 (99%)
Strand = Plus / Plus
Query: 2648 ttaatatttttataattaaaactaaactaacgtttatttgtaatatttctagtatactta 2707
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 12 ttaatatttttataattaaaattaaactaacgtttatttgtaatatttctagtatactta 71
Query: 2708 tcaacgaaagtaatgtggccaacaacaattatttatacatagatagtctttgttatgaat 2767
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 tcaacgaaagtaatgtggccaacaacaattatttatacatagatagtctttgttatgaat 131
Query: 2768 gttatattttgtatctacatactgtagtgacgtaggcttgctaggcgtcattattcttat 2827
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gttatattttatatctacatactgtagtgacgtaggcttgctaggcgtcattattcttat 191
Query: 2828 tgctaaaaataatgtagaattatgtaactgacaatagtaaaattgttctcattgattaca 2887
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 agctaaaaataatgtagaattatgtaactgacaatagtaaaattgttctcattgattaca 251
Query: 2888 cgacgatcattacagaagcttttaagttgtattagccatagaaaattgtacaaaccttat 2947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cgacgatcattacagaagcttttaagttgtattagccatagaaaattgtacaaaccttat 311
Query: 2948 agattaatgacattccataacactagtcagtgtaatggacatttactgtttagttaataa 3007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agattaatgacattccataacactagtcagtgtaatggacatttactgtttagttaataa 371
Query: 3008 gatgta 3013
||||||
Sbjct: 372 gatgta 377
Database: est
Posted date: Jul 14, 2011 2:25 PM
Number of letters in database: 8,280,457
Number of sequences in database: 9484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Sequences: 9484
Number of Hits to DB: 342,470
Number of extensions: 6383
Number of successful extensions: 6383
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 6383
Number of HSP's successfully gapped: 1
Length of query: 3013
Length of database: 8,280,457
Length adjustment: 18
Effective length of query: 2995
Effective length of database: 8,109,745
Effective search space: 24288686275
Effective search space used: 24288686275
X1: 11 (21.8 bits)
X2: 15 (29.7 bits)
X3: 50 (99.1 bits)
S1: 12 (24.3 bits)
S2: 34 (67.9 bits)